Labeo rohita (rohu): 127152063
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Entry
127152063 CDS
T09007
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127152063 (fubp1)
03041 Spliceosome [BR:
lroh03041
]
127152063 (fubp1)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
127152063 (fubp1)
Spliceosome [BR:
lroh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127152063 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
127152063
NCBI-ProteinID:
XP_050948424
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All DBs
Position
2:7908645..7916919
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AA seq
654 aa
AA seq
DB search
MADYSSVAPPSSNAGGGMNDAFKDALQRARQIAAKIGGDGVPPSPVSNEFGYGGQKRPLE
DGDQPETKKVPPSDPFSSVMGGMGGPPRSLSEEFKVPDGMVGFIIGRGGEQISRIQQDSG
CKIQIAPDSGGMPERSVTLTGSPDSIQTAKRLLTDIVEKGRPSPAFHHNDGPGMSVQEIM
IPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRISGDPFKVQQAKDMV
MDLIRDQGFREQRGEYGSRVGGGDSLDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFK
PDDGSTPERIAQIMGPPDRAQHAADIISDLLRSVESGGPPGHGGRGRGRGQGNWNMGPPG
GLQEFTFTVPTMKTGLIIGKGGETIKSISQQSGARIELQRNPPPNSDPNIKIFTVRGSPQ
QIDYARQLVEEKIGGPVSPMGGPHGPPGPHGGPSHGPPGPPGPPAPMGPYNPGPYGQGPP
GPHGPPAPYQPQGWGNGYPHWQQGQPDPICSADKAAADANAAAWAAYYSQYQQQPQGPMT
PTSAAPGTTQTNGQGDPQAPGQSGQADYTKAWEEYYKKLGQGQPQQDYTKAWEEYYKKQG
QAAPQAAAAAAASQPGGQPDYSAAWAEYYRQQAAYYGQGAPQAMGAAPQAQQGQ
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggccgactattctagcgtggctccaccgtcctcgaacgccggtggagggatgaacgat
gcttttaaagacgcccttcagagagccagacagatcgctgcaaaaataggaggtgatggt
gtacccccctccccagtttccaatgagtttggttatggaggacagaagagaccccttgaa
gatggagatcaaccagaaaccaagaaggttccaccaagtgatcctttttcatctgtaatg
ggaggcatgggaggcccaccaaggtctttatcagaagagttcaaagttccagatggcatg
gttggcttcattattggaaggggaggagaacagatttcaagaatacagcaggactcaggt
tgcaaaatacagattgctcccgacagtggtggcatgcctgagagatctgtgacattaaca
ggctcacctgattcaatccagacagcaaagaggttgctcacagatattgtagagaaagga
agaccttctccagcattccaccacaatgatggaccagggatgtctgttcaggagatcatg
atccctgcctccaaagctggtctggtcatcggaaagggaggagaaacaatcaaacagtta
caggaacgtgctggagtcaaaatggtcatgattcaagatggacctcaaaatacaggtgct
gataaaccgctcaggatctctggcgatccttttaaagttcagcaagctaaagacatggtg
atggatctaatcagagatcagggtttccgggaacagagaggagagtatggttctagagta
ggtggtggagacagtctggatgtccctgtgccaaggtttgcagtgggaattgtgattggc
aggaatggtgaaatgatcaagaagattcagaatgacaccggtgtgaggattcagttcaaa
ccagatgatggttccacaccagagaggatcgctcagattatggggcccccagatagggca
cagcacgcagcagatatcatatctgacctgctgagaagtgtggagtctggaggcccccct
ggtcatgggggcagagggaggggccgtggacagggaaactggaacatgggccctcctgga
ggcctgcaggaattcactttcactgtgcctaccatgaagaccggcctcattattggcaaa
ggaggtgaaaccattaagagcatcagccagcagtcaggagccaggatagagttacaaaga
aaccctccacctaattcagaccctaatataaagatcttcacagtccgtggatcacctcaa
cagattgattacgccagacagctagtcgaagagaagattggaggtccagttagccctatg
ggtggccctcatggtcctcctgggccccatggaggtccttctcacggcccacctggtcca
ccaggaccacctgctcccatgggcccatacaaccctgggccctatggccagggccctcct
ggaccacatggtcccccagcaccgtaccagcctcaaggctggggcaacggataccctcac
tggcagcaaggacagccagatcccatttgttctgcagataaagcagcagctgatgctaat
gcggccgcatgggcagcttattattctcagtaccagcagcagccccagggccccatgaca
ccaacgtcagcagcccctggcacaacccaaaccaatggacaaggtgacccgcaagctcca
ggtcaaagtggacaggcagattacaccaaggcctgggaggaatattacaagaaattgggt
caaggacagcctcagcaggactacacaaaggcatgggaagagtactataagaaacaaggt
caagctgcgccacaggcagcggcagcagcagcggcgtctcagccaggaggtcagccagat
tacagtgcagcgtgggcagaatactaccgccaacaggcagcgtactatggccaaggtgcc
cctcaggcaatgggagctgcaccccaggctcagcagggccagtaa
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