Labeo rohita (rohu): 127152134
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Entry
127152134 CDS
T09007
Symbol
nedd4l
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04120
Ubiquitin mediated proteolysis
lroh04144
Endocytosis
lroh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127152134 (nedd4l)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127152134 (nedd4l)
09144 Cellular community - eukaryotes
04530 Tight junction
127152134 (nedd4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127152134 (nedd4l)
04121 Ubiquitin system [BR:
lroh04121
]
127152134 (nedd4l)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127152134 (nedd4l)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
127152134 (nedd4l)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
HECT type E3
127152134 (nedd4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
MUG113
Motif
Other DBs
NCBI-GeneID:
127152134
NCBI-ProteinID:
XP_050948575
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All DBs
Position
21:24038483..24131618
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AA seq
1279 aa
AA seq
DB search
MSHRLRLYFGSGRSNTAPELEQLNGTAEDRDESDYSGARATMFHSQTQNGGRSESPESGA
CSDGSLKRSSSMFIPQLQSQTEPRTTKSTSVQISLQRTTAPQEEALPFDPPPGYPQDPAP
AYTEPDESWYLPPPPAYHRGEPPSFQSVEPLTEPIQPKRQVFCVRPCDGQNGYATMGVPN
NQGITIGGFCIRRRSADGADVQQFRIMPYTENAQNGHRWSVQQTSDRGPGTQRLVFQLQQ
DQGQQPSPTPQADVGDLGITGTKGSRFVRYPRIRLERSASQPLQPRGAPSRLGSMPNLHE
PISEMETESEIAENGAQGCTFKIRKEQSSRQPKFKIYFSQGGEHSPILARDVSFGKAPTC
SNSQAHIGRDRSKNGHFNHSQTRDDFLGQVDVPLTHLPTEDPAMERPYTFKDFLLRPRSH
KSRVKGYLRLKMAYLPKNGGHEEESSEMREEAEGWEVTDSTDPGSQRPQQLLPPLPPGWE
EKVDNLGRTYYVNHNNRTTQWKRPSSVDVVSETENDNHLRQINQEAHRVFRSRRHISEDL
ENEQLDIRDIDDSWEPISEEDPALMTDGLNHSLSGPSSLAMPLSSTPEFSDEISLRLSLA
PDTNGEIPGPSSAVQSHLSSRLRSSSMTDGVSDQAQPPTPTQSSQTRRTRAQTVTGVEDT
MSPSASYALTTPGLPPGWEERKDPKGRTYYVNHNNRSTTWTRPILQQHTEDGASTSAAAV
GGATAATTPASTPSSSSGHLSEPQVRRPRSLSSPTVTLSSPLEGANNAQIRRAVKDTFSN
PQSPQPSPYSSPKSQHKANQSFLPPGWEMRIAPNGRPFFIDHNSRTTTWEDPRLKYPVHM
RTKASLDPGDLGPLPPGWEERVHADGRTFYIDHNTKKTQWEDPRLQSPAITGPAVPYSRE
FKQKYDYFRKKLKKPADIPNRFEMKLHRNNILEESYRRIMSLKRPDSLKARLWIEFESEK
GLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRV
AGMAVYHGKLLDGFFIRPFYKMMLGKQITLNDMESVDSEYYNSLKWILENDPTELDLRFC
IDEDNFGQTYQVDLKPSGSDMVVTNDNKKEYIDLVIQWRFVNRVQKQMNAFLEGFTELIP
VDLIKIFDENELELLMCGLGDVDVNDWRQHTVYKNGYCPNHPVIQWFWKAVLLMDAEKRI
RLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGTPDKLPRAHTCFNRLDLPTYESFED
LREKLLMAVENAQGFEGVD
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaccggcttcggttgtatttcggatcagggcgcagtaacactgcgccggagttg
gagcaactaaatgggacggcggaggacagagatgagagtgactacagcggtgcaagggcc
actatgttccattcgcagactcaaaacggagggcgttcagaaagcccggaatcgggtgct
tgttcagacggctctctaaagcgaagctcttccatgttcatcccacagctccagagtcaa
actgaaccacggactaccaagagcacttctgtccagatatctcttcaacgcacaactgcg
cctcaagaagaggctttgccctttgatccacctccagggtaccctcaggatccagctcca
gcttacaccgagcctgatgaaagctggtacttacctccaccaccagcttaccacagagga
gaacccccatccttccaaagcgtggaaccacttactgagcccatccagccgaagaggcaa
gtcttttgcgtccggccatgtgatggacaaaatggttatgccactatgggtgtacccaat
aatcaaggaattaccattggaggtttctgcattcgaagaagatctgcagatggtgcagac
gtccaacagtttaggatcatgccgtacaccgagaacgcccagaatggccaccgctggtct
gtccagcaaacctcagatcgaggtcctggcacgcaaagacttgtcttccagcttcagcag
gatcaaggacagcagcctagccctactcctcaggctgatgtgggtgatttgggcatcacg
ggtactaaaggcagccgctttgtgcggtaccctcgaatccgacttgagaggagcgcttcg
cagccgttgcaacccagaggagctccttcccgcctcggatctatgccaaaccttcatgag
ccgatctccgaaatggagaccgagagtgagatcgctgagaacggggctcaaggttgtaca
ttcaaaatcaggaaggagcagagctcccgacagcccaagtttaagatctatttcagccag
ggaggtgagcacagccccatccttgcacgggatgttagctttggaaaggcgcctacctgc
agcaactcacaggctcacattggtcgtgatcggtccaagaatgggcatttcaaccatagt
cagaccagagatgacttcctcgggcaggtggatgtgcctcttacccatttaccgacggag
gaccctgcaatggagcgaccgtacacgtttaaagactttctcctgcgtccaagaagtcat
aagtctcgggtgaaaggttacctgaggctgaagatggcctacctgccaaagaacggagga
catgaggaggaaagcagcgagatgagagaagaagctgagggctgggaggttacagactcc
acagatccaggttcacagagacctcagcagctcctgcctccgctgcctccgggctgggaa
gagaaggtggataacctgggacggacgtactacgtcaaccacaacaaccgcaccacacag
tggaagaggcccagtagtgtggatgtggtttcagaaacggaaaatgataatcacttgcgg
cagattaaccaggaagcccacagagttttccgctctcgacggcacattagcgaagacctg
gaaaatgagcagctggacatcagggacatagacgactcatgggaacccatatcagaggag
gacccagctttaatgacggacggtctgaaccattctctctctggaccatcctctctggcg
atgcccctctctagcactcccgaattctccgatgaaatcagccttagattgtctcttgcc
ccagacacgaatggagaaatcccaggacccagctctgctgtgcagagtcatctttcctct
cggctacgctcctctagtatgactgatggagtcagtgatcaagctcagcctcccacacca
acgcagagctcccagacccgacgaacaagagcacaaacggtcacaggcgttgaggatacc
atgtctccatcggcctcctacgccttgaccacaccaggccttccaccaggctgggaggaa
cgcaaagaccccaagggacgaacgtactacgtcaaccacaacaaccgtagcaccacctgg
acgcggcccattctgcagcagcacactgaagatggagccagtacctcggctgcggcagta
gggggcgctacagcagccacaacccccgcttccaccccttcctcttccagcggccaccta
agtgaaccacaagtgcgcagaccccgtagcctcagctcccccacagtcactctctcttcc
ccactagagggagccaataacgcccagatacggcgagccgtaaaggacacgttttccaac
cctcagtccccgcagccttctccctacagctcccccaaatcccagcataaagcaaaccag
agcttcctgccccccggatgggaaatgagaatagcacccaatggacggccgttcttcatc
gaccacaatagccgaaccaccacatgggaagatcctcgcttaaagtatcccgttcacatg
aggacaaaagcatccctggaccctggcgacctcggcccacttcctcctgggtgggaggaa
cgagtgcacgcagatggaagaaccttttacatcgaccataacaccaaaaaaacgcagtgg
gaagaccctcgcctccagagtcctgccataactggacctgcggtgccatattccagggaa
ttcaagcagaagtatgactacttcagaaagaagttaaagaaacccgcagatattccgaac
cgttttgagatgaagctgcacaggaataacatcttggaggagtcgtacagacggatcatg
tcgctgaagagacccgacagcctgaaggcccgtctgtggatcgagtttgaatcagagaaa
ggcctggattatgggggcgtggccagggaatggttcttcctgctctccaaggagatgttt
aacccttattatgggctgtttgagtactcggccacagataactacacccttcagatcaat
ccaaactctggtctctgtaatgaggatcacctctcatactttaagttcatcggtcgggtg
gctggcatggctgtgtatcacggaaaactgttagacggtttcttcattcgaccattctat
aaaatgatgctgggcaaacagatcacactgaatgatatggagtcagtggacagtgaatac
tacaactctctcaagtggattctggaaaacgatcctacagaactggacctgcggttctgc
attgatgaggacaactttggacagacatatcaggtggatttgaagccaagcggatcagac
atggttgtaaccaatgacaacaaaaaagaatacatagacctggtgattcagtggcggttt
gtgaaccgggtccagaaacagatgaatgcctttttggagggcttcaccgaactcattccc
gtcgacttgataaagatttttgacgaaaacgaactggagctgctgatgtgtggtctgggt
gacgtggacgtcaatgactggaggcagcacaccgtctataagaatggctactgtcccaat
caccctgtgatccagtggttctggaaggctgtgttgttaatggatgccgaaaagcggatc
agacttttgcagttcgtcactggaacatccagagtgccaatgaacggctttgctgaactc
tacggttccaatgggccgcagttgtttactatcgagcagtgggggacacctgacaaactc
cctcgtgctcacacctgctttaatcgtctggacctcccgacgtacgagtcgtttgaagac
ctgcgcgagaagcttctgatggcggtggaaaacgcccaaggctttgagggcgtcgactaa
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integrated database retrieval system
