Labeo rohita (rohu): 127152245
Help
Entry
127152245 CDS
T09007
Symbol
cldn30
Name
(RefSeq) claudin-4
KO
K06087
claudin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03272
Virion - Hepatitis viruses
lroh04382
Cornified envelope formation
lroh04514
Cell adhesion molecule (CAM) interaction
lroh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
127152245 (cldn30)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
127152245 (cldn30)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127152245 (cldn30)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127152245 (cldn30)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lroh03037
]
127152245 (cldn30)
04147 Exosome [BR:
lroh04147
]
127152245 (cldn30)
Cilium and associated proteins [BR:
lroh03037
]
Other cilia and associated proteins
Stereociliary proteins
127152245 (cldn30)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
127152245 (cldn30)
Exosomal proteins of colorectal cancer cells
127152245 (cldn30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
CRPA
TMEM_230_134
Motif
Other DBs
NCBI-GeneID:
127152245
NCBI-ProteinID:
XP_050948763
LinkDB
All DBs
Position
21:complement(13886994..13889032)
Genome browser
AA seq
311 aa
AA seq
DB search
MVSLGMHMLASALSLLGWVGALLSCIMPMWRVTAFIGTTIVTSEIMWEGIWMSCVIQSTG
QMQCKPYESTLALGTDLQAARALTVMAILLGGVGLVLAFIGGKCTVFMDRSKRSKARVAT
AAGVTLIVAGVLILIPVSWSAGIVVRAFYNPQMADSQRREIGGAIYVGWGASIILILGGG
MLCTTICKDKSEDDSGRSVKYLIVRSSQAGSSRAGSQRMRPISVRSMQSGAPSVRSQWSQ
KPPFNQGRPPSVGSYQSRPSTTKSQLAKAESMPESEQDEWALTKSPKLIDDGLDQTLDAF
EPSESDPKTYI
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggtttctctaggcatgcacatgctagcgagcgccttatcgctacttggatgggtagga
gcgctcctgtcctgcatcatgccaatgtggcgtgtgacagccttcattggaaccacaatt
gtaacttcagagatcatgtgggagggcatttggatgagttgcgtgatccaaagcacgggg
caaatgcagtgcaaaccgtacgagtccacgctcgcgttgggcacagatctgcaggccgct
cgggccctcacggtgatggcgatccttttaggaggcgtaggcctcgttttagccttcatc
ggaggaaagtgcaccgtcttcatggaccgctccaaaagatccaaagcgagggtcgccaca
gcagccggcgtcacgttgattgtcgctggagttctcatcctgatccccgtctcatggtcg
gctggcattgtggttagagcgttttacaacccgcagatggccgattcgcagcgaagggag
atcggcggtgccatttatgtcggttggggtgcatccatcatcctcattttgggtggagga
atgctctgcaccactatctgcaaagacaaatcagaagacgacagtggtcgttcggtgaag
tacctcattgtgcgctcttcacaggcagggtccagcagggcgggctcccaaaggatgcgt
cccatctctgtgaggtcgatgcagagtggtgctccatctgtaaggtcccaatggagtcag
aaaccccctttcaatcagggcagacctccttctgtgggctcttaccagagcaggccatca
actacaaagtctcagcttgccaaagctgaatcgatgccagagtctgagcaggatgagtgg
gcgttgactaagtcccctaagctgattgatgatggtttggatcagacactggatgctttt
gaacctagtgaaagtgatcccaagacatacatttga
DBGET
integrated database retrieval system