Labeo rohita (rohu): 127152261
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Entry
127152261 CDS
T09007
Symbol
eri1
Name
(RefSeq) 3'-5' exoribonuclease 1
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127152261 (eri1)
03036 Chromosome and associated proteins [BR:
lroh03036
]
127152261 (eri1)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127152261 (eri1)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
127152261 (eri1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
SAP_new25
Motif
Other DBs
NCBI-GeneID:
127152261
NCBI-ProteinID:
XP_050948790
LinkDB
All DBs
Position
21:18451746..18455819
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AA seq
337 aa
AA seq
DB search
MESQKKTSQPENKTSKSEEDEEEQCCGNTSCEKSEKQEPSSPKQGDFSDPVYKEIAVANG
AINRMNRDELRAKCAELKLDTRGVKDVLRKRLKSYYKRQKLMLSSAANGNSDVYFDYICV
VDFEATCEENNPPDYLHEIIEFPMVLIDTHTLEIVDSFQEYVKPVVNPQLSEFCIKLTGI
TQKMVDEAATFHQVLKRAVSWLQEKELGTKYKYTFLTDGSWDMGKFLHTQCKLSSIRYPQ
FARKWINIRKSYGNFYKVPRTQTKLICMLENLGMQYDGRPHCGLDDSRNIARIAIHMLED
GCQLRVNECLHSGEPRSVPISAPIEGAPAPQTPKKRN
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccagaaaaagaccagtcaacctgaaaataagacttcaaagtctgaggaagac
gaagaggagcagtgctgtggtaatacttcctgtgaaaaaagtgagaagcaggagccttca
tcaccaaaacagggagatttcagtgatccggtgtataaagagatcgcagtggcaaacggc
gccatcaaccgaatgaacagagatgagctacgtgcaaaatgtgctgagctaaagcttgac
acacggggagttaaagatgtcctgagaaagcgcctgaaaagttactacaaaaggcaaaaa
ctgatgctttcatctgctgcaaatgggaacagtgatgtgtattttgactacatctgtgtg
gtggattttgaagcgacatgtgaagagaataacccacctgactacctgcatgaaatcatt
gagtttcccatggtgttgatcgacacacacaccttggagattgtagactcatttcaggag
tatgtgaagccagtggtgaacccacagctctctgagttttgtataaaacttactggaatc
acacagaaaatggtggatgaggcggcgacattccatcaggttctaaagcgagcagtttcc
tggctacaggagaaagaacttggcacaaagtacaaatatacatttttaacagatgggtca
tgggacatgggaaagtttcttcatacccagtgtaaactgagttccatcagatacccacag
ttcgccagaaaatggatcaatatcagaaagtcttatggaaacttttataaggttcctcgt
actcagacaaaactaatctgcatgctggagaatctcggtatgcagtatgacggacgtccc
cactgtggtctagatgactcccgcaacattgcgaggattgccatccacatgctggaggac
ggctgtcagctgcgggtgaacgagtgcttgcattcaggagaaccacggagcgtgcctatc
tccgcccctattgaaggagccccagcacctcaaacccctaagaaaagaaactaa
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