Labeo rohita (rohu): 127152355
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Entry
127152355 CDS
T09007
Symbol
ebf1b
Name
(RefSeq) transcription factor COE1-A isoform X1
KO
K09103
early B-cell factor
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127152355 (ebf1b)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
127152355 (ebf1b)
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Paralog
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Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
127152355
NCBI-ProteinID:
XP_050948927
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Position
21:complement(4858252..5013324)
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AA seq
604 aa
AA seq
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MFGIQESIQRSGSILKEEPIGAGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTSFVGFVEKEKETTGEKTNNGIHYRLQLLYSNGI
RTEQDFYVRLIDSMTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVEGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTPSYLEHAAAPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTML
VWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRL
QKVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYNVPRNHN
QLTGLTNSSVHASMMGVNSFTGQLAVNVSESSQGGNQGFSRNTSSVSPHGYVPSSTPQQS
SYSTVSTSMNGYGNSGMTNLTGSPSFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSG
IFSFSPANMVSAVKQKSAFAPVVRPQSSPPPTCTSTNGNGLQDQSFVDSNKYSTASALQG
LAFS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggagagcatccaaaggagtgggagtattttgaaagaggagcccatc
ggagccggcatgaacgcagtccgaacatggatgcaaggcgccggggtgctggatgcgaac
acggccgcgcagagtggagtgggactggcccgggcgcacttcgagaaacagccgccctca
aatcttcgcaaatccaacttcttccacttcgttttagccctttatgaccggcaaggacaa
ccggtggaaattgagagaacctcttttgtcggatttgtggaaaaagagaaggagactaca
ggagagaagacaaacaatggcatacattacagactgcaacttctctacagcaacggaatc
agaacagagcaggatttttatgtaagactaattgactccatgactaaacaggccatcata
tatgaaggtcaagacaagaacccggagatgtgccgtgtgctcctgactcatgaaatcatg
tgcagccgttgttgtgacaaaaagagttgcgggaaccgcaacgagacaccctcggatccc
gtcatcatcgacagattttttctgaagtttttcctaaaatgcaatcagaactgcctgaag
aatgcaggaaatccacgggatatgaggcgctttcaggttgttgtgtcgacgacggtgagc
gtagaaggacacgttctggctgtttcggacaatatgtttgtgcacaacaactccaaacat
ggcagaagagctcggcgactggacccgtcagagggaacgccgtcatatctggaacatgca
gctgcaccttgtatcaaagccattagtccgagtgaaggttggacaacaggaggtgccact
gtcatcatcattggagacaacttctttgacggactgcaggtcatcttcggcaccatgttg
gtctggagcgagctcatcacacctcatgcaatcagagttcagacccctcctcgtcacatc
cctggggtggtagaggtcacgctttcctataaatccaaacagttttgcaaaggcacacca
ggaagattcatctacacagctctgaatgagcccaccatagactacggttttcagcgatta
cagaaggtgataccacgacatccaggagaccctgaacgccttccaaaggaagtgattttg
aagagagcagcagatctagtggaagcactttatggaatgcctcataataaccaggaaatc
attttgaagcgagcagcagacattgctgaagccctgtacaatgtgccacgaaaccacaac
cagctcaccggcctcaccaacagctctgtccatgcaagcatgatgggagtgaactccttc
accggacagctcgccgttaacgtctcagagtcgtctcagggtggaaaccagggtttcagt
cgtaacacgagtagcgtatcaccacacggatatgtgcccagttctacccctcagcagagc
agttacagcacggtatccaccagcatgaatggatatggcaacagcggcatgaccaacctg
actggctccccgagcttcctgaatggctctgctgccaattcgccctacgcaatcgtcccc
tccagccccaccatggcctcttccaccagcctgccctcaaactgcagcagctcctctgga
atcttctccttctctccggcaaacatggtttcagctgtgaaacagaagagcgcgttcgct
cctgtcgttcggccccagtcctcacctccacctacatgcaccagcaccaatgggaacggt
ctccaagatcagtcttttgtcgactctaacaagtactccacagccagcgcgctccagggc
ctggccttctcctga
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