Labeo rohita (rohu): 127152359
Help
Entry
127152359 CDS
T09007
Symbol
tlr22
Name
(RefSeq) toll-like receptor 22
KO
K18808
toll-like receptor 13
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lroh04054
]
127152359 (tlr22)
Pattern recognition receptors [BR:
lroh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
127152359 (tlr22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_9
LRRCT
Motif
Other DBs
NCBI-GeneID:
127152359
NCBI-ProteinID:
XP_050948933
LinkDB
All DBs
Position
21:complement(5642383..5646064)
Genome browser
AA seq
945 aa
AA seq
DB search
MGILKQITLYIALCSLISSSSAFSLKNCTISTPLKDTQPKVLCYKMGFFSFPWIPTNTRI
LDISFNAFTQIQIGDFSNLSNLQDVNISHNKISWIQEGAFDSLSNLTHLNLASNRLKGIS
GGMLHGLTNLLVLGLDNNYIQDIEESAFSTLQNLKVLNLTKNHLCYIEKIKPVFASPYLE
ELYIGSNHFDAFNSYEMSTKPLSLKRLDFSNNPLATFHLTENIFPSLSHLDLSYCGQNGT
MIWNVTEKTFFASVKTLYFMDVHMSAQNAANVLQSFKNLSNKIRLNGNVKLNTTNLLLNA
CSPVLKVVRLNANKIKHLTNHMFDPCSDLAEVDLGDNEISELSPSMFRGFTQLKTLRLQI
NKLTRITNSFQMLFTLEFIDLSRNSIKTLTCKDFANLTQVKSLYLYSNKISVIDSCLFKD
LKSLEVLKLGTNHLLRIGDAFSNGPHSLLDLQLSFNKLSKIEKYAFRNVSQLNNLSLQDN
QISEIEGHAFEGLNNLTSLLLSSNKISAKTLTSHQNVFSGMPNLKNLELQANSISFMDDQ
LKHPPFTDLKQLRVLSLHSQRRGIGKIPSNLLQGLSSLEMFYAGNTNLGHLNPDTFKFNP
QLWFLELSKNALSEDNSIPAELFHPISGLTKLILSRTQLRSLNFLLNASLSRLSTLRARG
NEIDSINKTLIQSLPRLEVLDLEKNTFTCDCNNAFFIDWAKNINSTQVIYLNKYMCSYPP
SLRGMSLSDFNTESCTLKIDFICFLCSSIVVTLTLLSSFVWHFLRFQVVYAYYLFLAFLY
DNKKKHNGSSFQYDAFISYNTEDESWVMEELIPKLEGEQGWRLCLHHRDFEPGRPIIDNI
IDGIYSSRKTICLITRNYLKSNWCSSEVQVASFRLFDEQKDVLILVFLEDIPTHQLSPCH
RMRKLVKKRTYLRGPKPGEDTKIFWQKLKMALETKEGHNSDRGIL
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgggaatactaaaacaaatcacattatatattgccctctgtagcttaatttcctcttct
agtgcattttccttgaagaactgcacaatcagtactcctctaaaagacacccagccaaaa
gtactttgctacaaaatgggctttttcagctttccatggattcctacaaatacacggatt
ttagatatttccttcaatgcttttacacagatccagattggggattttagtaatttgtca
aacttacaggacgtgaacatatctcacaataagatctcatggattcaagagggtgcattt
gacagtctttccaatttaacccatctcaatctggccagcaacagactaaaaggaatctca
ggaggtatgctacatggcctgaccaacctactggtgctaggtctagataacaattatata
caagacattgaagagtcagctttcagcacgcttcagaatttaaaggtgttaaacctaacg
aaaaaccacctctgttatatagagaaaatcaagcctgtttttgcatcaccatatttggaa
gaactgtacattggaagcaaccattttgatgcgttcaactcatatgaaatgtcaacaaaa
cccttgtcgttaaaaagacttgatttttccaacaatcctttggcaacatttcatcttact
gaaaatatatttccatctctcagtcaccttgatttatcttattgtggtcaaaatggaacc
atgatatggaacgttacagaaaagacattcttcgcctctgtgaaaacattatacttcatg
gatgttcatatgtcagcccagaatgctgctaatgtgcttcagagcttcaagaatttgtcg
aataaaattaggcttaatggaaacgttaagctgaacacgactaacctcctgctgaacgca
tgttctccagtgctaaaagtcgtgcggctgaatgctaacaaaataaaacacctcaccaac
cacatgtttgatccctgttctgacctggcggaagtagatttaggagataacgaaatatcc
gagttatcaccgagtatgttcagaggatttacacaactaaaaacgctgcgtttgcaaatc
aacaaactgactcgaataacaaactcctttcaaatgctcttcactctcgagttcatcgat
ctcagcagaaacagcatcaagacgctcacctgtaaagactttgccaatttaacacaggtg
aaatctctgtacttgtacagtaacaaaatctcagttattgattcctgtttgttcaaggac
ctgaagagtcttgaagtcctcaagcttggaacaaaccatctgttaaggatcggtgatgct
tttagcaatgggccacattccctgctggatctgcaactttcttttaataagctaagcaaa
atcgaaaagtacgcttttagaaatgtgtcacagctgaacaatttgtccttacaagacaat
cagatttctgagatcgaaggccatgcatttgaaggactgaataacctgacgtctcttttg
ctgtcatcaaataaaatatcagctaaaacgttaaccagtcaccagaatgtgttctcaggc
atgcccaacctcaaaaatctagaattgcaagccaacagcatctcatttatggatgatcaa
ttgaaacaccctccttttacagacctgaagcaactcagagtgttgtccttacacagtcaa
cgtcgtggaattggcaaaataccctctaatctgcttcaaggtttatcctccttggaaatg
ttttatgctggaaacaccaatcttggtcatctgaatcctgatacattcaagttcaaccca
cagctctggtttttggaactctccaagaatgcgctgtctgaagacaactcgatcccggct
gagttgttccaccccatttcgggtctaaccaaactcattctttcaagaacgcagcttcgc
tcgttgaacttcctgttgaacgccagtctctccagactttcaactttaagagctcggggc
aatgagattgactcaatcaacaaaactctgattcagtccctgcctcgactagaggtcctc
gacttggagaagaacacattcacctgtgactgcaacaatgcattcttcattgactgggcc
aagaatattaattccactcaggtgatttatttgaacaagtacatgtgtagctatcctcct
tccttacgaggcatgagcttgtctgatttcaacacagaatcctgcaccttaaagattgac
ttcatctgctttctttgcagcagtattgtggtcactctcaccctcctctcgtcatttgtc
tggcattttctgcgctttcaggtggtttatgcatattaccttttcttagccttcctttac
gacaacaagaagaagcacaacggttcgtcgttccagtatgacgccttcatttcctacaac
actgaggatgagtcttgggtaatggaggaacttattcccaaattagaaggagaacagggc
tggagattgtgcctgcaccacagagactttgaaccaggaaggccaataatagacaacatc
attgatggcatatacagtagccgcaagaccatctgcttgatcactaggaactacctgaag
agcaactggtgttcaagtgaggtccaggtggcgagcttcagactctttgatgagcagaag
gatgtcctgattctggtgttcctggaggatatccctacacatcagctctctccgtgccac
aggatgaggaagttggtgaagaaacgaacctacctccgtgggcccaaaccaggggaagat
actaagatcttctggcaaaagctaaaaatggctttggaaaccaaagagggtcataattca
gataggggaattctgtga
DBGET
integrated database retrieval system