Labeo rohita (rohu): 127152360
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Entry
127152360 CDS
T09007
Symbol
chm
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lroh01006
]
127152360 (chm)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127152360 (chm)
Prenyltransferases [BR:
lroh01006
]
Protein prenylation
Rab geranylgeranyltransferase
127152360 (chm)
Membrane trafficking [BR:
lroh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127152360 (chm)
Endosome - Lysosome transport
Rab GTPases and associated proteins
127152360 (chm)
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Gene cluster
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
NAD_binding_8
Motif
Other DBs
NCBI-GeneID:
127152360
NCBI-ProteinID:
XP_050948935
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All DBs
Position
21:5431369..5503596
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AA seq
665 aa
AA seq
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MAAEDLPSQFDVVILGTGLTESVIAAACSRVGQSVLHLDRRNYYAGNWASFTFNGLLSWI
EDYKNQQEVQITESEQVWRSLIDEGEDVVPLSTVDSSISNLEVFCYASEEEEKEEETKAP
LTSCQPASEEPNSDSTEAQDTVTGDDATASDVQTQNEEQEVSEPKEEQHTSDISEPSQSQ
EEKESQATSSPADPPVEVEKKITYQKLVKEGRRFNIDLVSKLMYARGALVDLLIKSNVSR
YAEFKNIGRILTCRNGKVEQVPCSRADVFASKQLTVVEKRMLMKLLTFCLDFEQHPEEYE
DYSEKPFRDFLKNKKLTENLQDFVLHSIAMVTQQTLTEEGLKATQHFLRCLGRYGNTPFL
FPLYGLGEIPQCFCRMCAVFGGIYCLRHSVQCLVVDKASNKVKAVIDTRGQKISCSHFVV
EDSYIRDEQRQSTAYRQISRAVLITDRSVLSSESDQQISLVTIPPLESSAPAVRMVELCS
SSMTCMPGTYLVHLTCSSSGTAQEDLAPVVSQLFHVSTIPGEEPLEGAEERSKPSVLWVM
YFNMRDTSALDSSSYSLPSNVHVCTGPDSSLGSDYSIKLAESVFNHILPDEEFCPPAPNP
EDIIYDGDGPQAEGPGFDESTNAEADKSQAEEEGEKSPSTESSEPAEVDSVTQQAPSDPT
PSSEE
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggaggatctcccatctcaatttgatgttgttattctcggaacaggtctcacc
gagtctgtcattgcggcggcctgctccagagttggacagagcgttctgcatttggacagg
aggaactactatgctggaaactgggcaagcttcacatttaatggcctgctgtcgtggatc
gaggattataagaatcagcaggaggtacagatcacggagtcggagcaggtatggaggagc
ttgattgatgagggagaggatgtggtgcctctcagcactgtggattcctctatttccaac
ttagaagttttctgttatgccagtgaggaggaagagaaagaagaggaaacaaaggcccca
ttaacaagttgtcagccagcgtcagaagagcccaacagtgactctacagaggctcaagac
acggttacaggtgatgatgccacagcatccgatgttcaaacacagaacgaggagcaggaa
gtctctgagccaaaagaggagcagcatacatctgacatttcagaacccagccaatcacag
gaagaaaaagagtcgcaggcaactagcagcccagcagatccacctgtagaggtggaaaag
aagataacatatcaaaagctagtaaaagagggacgcagattcaacatcgacctcgtctcc
aagttgatgtatgcacgtggtgcactggtggatctgctcatcaaatctaatgtgagccgt
tacgcagagttcaagaacatcggccgcatcctcacctgtagaaatggaaaagtggagcag
gtcccgtgttcacgggcagatgtgtttgccagtaagcagctgactgtggtggagaaacgc
atgctgatgaagcttcttaccttctgtctggactttgagcagcacccagaggagtacgag
gactattccgagaaaccattccgagatttcctgaagaacaagaagctcactgagaacctg
caagacttcgtcctgcactccatcgctatggtgacgcagcagacccttacggaggaagga
ctaaaggccacgcagcacttcctgagatgcttgggtcgctatggcaacactcccttcctg
ttccctctctatggcctgggagaaatcccacaatgcttttgcagaatgtgtgccgtattt
ggaggaatttattgcctgcgacactcagtgcagtgcctggttgtggacaaggcgtcaaac
aaagttaaagctgtgattgatacacgtggtcagaagatcagctgcagtcattttgtggtt
gaagattcatacatcagagatgaacaaagacagagcacagcttataggcagatatctcga
gcagtgctcatcacggacagatctgtactatcttcagaatctgatcagcagatctcattg
gtgacgattcctcctctggaatcttctgcaccagctgtgaggatggtggagctctgttcc
tcctccatgacctgcatgcctggcacctatttggtccacttgacctgttcatcatctggt
acagcccaggaagatcttgctccagttgtatctcagttgtttcatgtttccaccattcct
ggagaggagcctttagaaggcgcagaggagcgaagcaagccttcagtgctgtgggtcatg
tacttcaacatgagagacacatcagccctggacagcagcagctacagcttgccaagcaac
gttcacgtgtgcaccggtcccgatagcagtctgggaagcgactactccattaaactggct
gaatccgtatttaatcatatcctccctgacgaagagttctgtccgcccgcacccaaccca
gaggacatcatctacgacggcgacggtccacaggccgaaggaccagggtttgacgagagt
acgaatgcagaagcggataaaagccaggcagaggaagaaggtgagaagagtccatcaact
gagagctctgaacctgcagaggtggacagtgttacccagcaggcaccctcagacccgacc
ccgtcctctgaagaataa
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