Labeo rohita (rohu): 127152361
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Entry
127152361 CDS
T09007
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lroh03009
]
127152361 (ddx52)
Enzymes [BR:
lroh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127152361 (ddx52)
Ribosome biogenesis [BR:
lroh03009
]
Eukaryotic type
90S particles
Helicases
127152361 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127152361
NCBI-ProteinID:
XP_050948936
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All DBs
Position
21:5648018..5661267
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AA seq
618 aa
AA seq
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MDAFDLFRKIGSGAKFDLKRFAKDAERFKVGKSQNKDSSNQLTGISFFGKETQENTSLES
RLSEDDVEDENEESDEEQASGKRKRTKVDEPVKTAHKKKKGAKKQDEDAEVEKSEEEGIQ
WMSSQDKVQDPNKESKDKSSLKRLKQLYKEKVNQIRHQNRINVHGTDIPDPVSTFEELQK
EYDLDPRIIQNIKAAGFKTPTPIQMQAIPLMMHKREILASAPTGSGKTMAFCLPLLAHLR
QPLNKGFRAIIISPTRELATQTHRELLKLSEGVGFRIHMINKGVEAVKKYGPKTAKKFDI
LVTTPNRLIYLLNQEPPAISLSSVEWLVVDESDKLFEDGKKGFREQLATIFLACTSPKIH
RVLFSATFATDVEEWCKLNLDNLVCVNIGPRNSAAETVEQQLLFVGSENGKLLAMRNLIK
QGFLPPVLVFVQSIDRARELFHELVYEGINVDVIHADRTQQQRDNVVSSFRSGKIWVLIC
TALMARGIDFKGINLVINYDFPTTAVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSIA
TVIKKAGCPVPEYMIGLKKIKSKVKRQLATKPPRRSTIRTTPRILFEKKPGKRKRRKRKA
AEKEAEAKGKPSEVISNS
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctttgacttgtttagaaagattggatctggagcaaagtttgatttgaaacgg
tttgctaaagatgcagagcgatttaaggtagggaagtctcaaaacaaggacagctcaaat
cagctgactggaatcagcttttttggcaaagagacacaagagaacacatctctggagtcc
agattaagtgaagatgatgttgaagatgagaacgaggagagtgatgaagagcaggcttct
ggtaaacggaaacggactaaagtggatgagccagtgaagacagcccataagaaaaagaaa
ggagctaagaaacaagacgaagatgcagaggttgagaagagcgaggaagaggggatccag
tggatgtcatcccaagacaaagtgcaagaccccaataaggaatctaaagacaagtcctcc
ttgaaaagactaaagcagctttataaggagaaggtgaatcaaatacggcatcaaaaccgg
attaacgtgcatgggacagacattccagatcctgtttccacttttgaagaactgcagaag
gagtatgatctggaccctcgaatcattcaaaacatcaaggcagcgggtttcaaaacccct
acacccatacagatgcaggccattcctctcatgatgcataaaagagagatactggcatct
gctccgacaggctctggtaagactatggccttctgtctgccccttctggctcatcttcgc
cagcccctcaacaagggtttcagagccatcatcatctccccaaccagagagctcgccact
cagactcacagagagttgctcaaactgtcagaaggagtgggcttcagaattcacatgatc
aataaaggagttgaagctgtgaaaaaatatgggcccaagacagcaaagaaatttgatata
ttggtgacgactcctaacagattgatatatttactaaatcaagaacctcctgctatcagc
ttaagcagtgtggagtggctggtggtggatgaatctgataagctctttgaggatggtaag
aagggattcagagagcagcttgccactatcttcttggcctgcacttctcctaaaatccac
cgtgttctcttcagcgcaaccttcgccacagatgtagaggagtggtgcaaactgaaccta
gacaacctcgtctgtgtcaacattggacccaggaactctgcagctgagactgtggagcag
cagcttctgtttgtgggttcagaaaatggaaagctacttgctatgagaaaccttataaag
cagggatttctaccgcctgtgttggtgtttgttcagtctattgaccgtgcccgagaactg
ttccatgagctggtgtatgagggaataaacgtggatgtgatccatgcggatcgcacacaa
cagcagagggacaatgttgtgagcagtttccgttcggggaagatctgggtgctgatctgc
actgctctcatggcccgtggtattgacttcaagggcatcaacctggttatcaactacgac
ttccctacgactgctgtggaatacatccaccggattgggcgaactggaagagcaggacac
aaaggaaaggcagtaactttcttcacagaggatgacaaacctctccttcgcagcattgct
accgtcataaagaaggctggatgtcctgtccctgagtacatgattgggttaaagaaaatc
aaaagcaaagtgaaacgtcagcttgcaacaaaaccacccagacggtcaacaattcgcacg
actccacgcattctctttgagaaaaagcctggcaagagaaaaaggagaaaaagaaaagct
gcagaaaaggaagcagaagcaaaaggcaaaccatcagaagtcatttctaacagctga
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