Labeo rohita (rohu): 127152426
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Entry
127152426 CDS
T09007
Symbol
cadm1a
Name
(RefSeq) LOW QUALITY PROTEIN: cell adhesion molecule 1a
KO
K06781
cell adhesion molecule 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127152426 (cadm1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127152426 (cadm1a)
Cell adhesion molecules [BR:
lroh04515
]
Immunoglobulin superfamily
Nectin family
127152426 (cadm1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
Ig_5
C1-set
C2-set_3
DUF4307
DUF6941
Motif
Other DBs
NCBI-GeneID:
127152426
NCBI-ProteinID:
XP_050949028
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All DBs
Position
21:complement(14984577..15341108)
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AA seq
433 aa
AA seq
DB search
MKQVSNMANTSNGSLATLLILFTISAAIYTGAAQFPVQSQNLIADNVSVVEGETATISCR
VKNNDDSVIQLLNPNRQTIYFKDVRPLKDARFQLVNFSDNELRVSLSNVSLSDEGRYVCQ
LYTDPPQEAYADITVSVPPGNPIIESREDIVKEGNETEITCTSMGSKPAATIRWMKGDKE
LQGKSKVEATYDRMFTVTSWLRFTVTREDDGVPVVCIVDHPAVKDFQAQKYLEVQYKPEV
TIKVGFPQGLIREGENLELTCQAKGKPQPHQVNWMRVDDEVPSHAVITGSDLYIENLNKS
YNGTYRCVASNSVGETYADYILYVRDALTTTPKPTTTTTTISATTSPPDIIQDSQAGPEA
QRLDHAVIGGVVAVVVFAMLCLLIVLGRYFARHKGTYFTHEAKGADDAADADTAIINAEG
GHNNSDEKKEYYI
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggtgtccaacatggcgaacacgagcaacggatctctcgctactctcctcatt
ttattcaccatttcggcagctatctatacaggagctgctcagtttccagtccaaagccag
aatctcatagcggacaacgtctcggtagtggagggagagacagccaccataagctgtcga
gtcaaaaacaatgacgactccgtcatccagctcctcaaccccaacagacagaccatctac
ttcaaagacgtcagacccctgaaagatgctcgtttccagctggtcaatttctcagacaac
gagctgcgtgtgtcgttatccaacgtctctctctcagacgagggaagatacgtgtgccag
ctctacacagaccccccacaggaagcctacgccgacatcactgtctcagtcccaccagga
aacccaatcatagagtcccgcgaggacattgtcaaagagggcaacgagacagagataacc
tgcacctccatgggcagcaaacctgctgcaacgatcagatggatgaaaggagacaaagag
ctacagggcaagtctaaagtggaggccacgtacgacaggatgttcactgtgactagctgg
ctgaggtttaccgtcacgagagaggatgatggagttcctgtggtttgcattgtcgaccat
ccagcggtcaaggactttcaggcgcagaaatacctggaagtacaatataaacctgaggtg
acgatcaaggtggggtttccacagggcctgattagagagggcgagaatctggaactgacg
tgccaggctaaaggcaaaccacagcctcatcaggtgaactggatgcgggtggatgacgag
gtgccgtctcacgcggttatcacgggctcagatctctacatcgagaacctcaacaagtcc
tacaacggcacttaccggtgtgtggcgtcgaactccgtgggcgaaacgtacgctgactac
atcctttatgtgcgcgatgcccttaccacaacccctaaacccacaaccaccaccaccacc
atctccgccacaacctcccctccagacatcatacaagattcacaagcaggaccagaagca
cagagattggaccatgcggttatcggaggagtggtggccgtcgtggtcttcgccatgttg
tgtcttctcatcgttttggggcgatactttgcaagacacaaaggcacctacttcacacac
gaagccaagggggcagacgacgcggcggacgccgacacggccatcatcaacgccgaaggg
ggccacaacaactcggacgagaagaaggagtactatatctga
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