Labeo rohita (rohu): 127152429
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Entry
127152429 CDS
T09007
Symbol
birc2
Name
(RefSeq) baculoviral IAP repeat-containing protein 2 isoform X1
KO
K16060
baculoviral IAP repeat-containing protein 2/3
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04120
Ubiquitin mediated proteolysis
lroh04210
Apoptosis
lroh04217
Necroptosis
lroh04510
Focal adhesion
lroh04621
NOD-like receptor signaling pathway
lroh05132
Salmonella infection
lroh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127152429 (birc2)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127152429 (birc2)
04217 Necroptosis
127152429 (birc2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
127152429 (birc2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127152429 (birc2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127152429 (birc2)
09171 Infectious disease: bacterial
05132 Salmonella infection
127152429 (birc2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127152429 (birc2)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127152429 (birc2)
Peptidases and inhibitors [BR:
lroh01002
]
Peptidase inhibitors
Family I32: IAP family
127152429 (birc2)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127152429 (birc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
BIRC2-3-like_UBA
CARD
zf-C3HC4_3
zf-C3HC
Prok-RING_4
zf-RING_2
zf-RING_5
zf-C3HC4_2
SHOCT_2
DUF2039
PMC2NT
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
127152429
NCBI-ProteinID:
XP_050949030
LinkDB
All DBs
Position
21:complement(16171460..16181383)
Genome browser
AA seq
628 aa
AA seq
DB search
MEIIQNSAFLRGLCRNSAPADLQYDNSSELFRISTYAKFPATAPVTERSLARAGFYYTGV
GDRVQCFRCSVTADNWKSGDCPAERHKQLSPTCSFIQSLPATANLLSSSHSAFSPLRNVA
ILQLSAPATAVASTTSASSSGQTEDQVGYLNMGFSNLAPSSPISSRGVEDMSHQRPPACH
NPSMRREQERLDTFQNWTLATVTPTELAKAGFYYLGQGDRVACFSCGGQLSNWKPGDRAV
SEHQRHYPNCRFVRGDRADNVPLSGGGLSNVSNSAMQQCEERLLTFVNWPSRIPVRPDQL
AKAGFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEYLLQEKGQEFVHQIQA
RFPRLFEQLLTNGENNSREFVDPPVVHLGPGEDRSEDAVMMNNPVVKSALEMGFERNLVK
QTVQSKILTSGENYKTVQELVSDLLSAEDEKREEERELLAEEMASDGFTFLKKHHAALTQ
RLKSVQSLMDHLLEENVISQKEYDIIRNCTTVKQQTGQLIDLVLSKGNAAAEVFRNWIKK
NDVYLLRELMAQTNEAASPSQDLSDLPMEEQLRRLQEERTCKVCMDKEVNIVFIPCGHLV
VCKECAPSLRKCPICRGLVKGTVRTFLS
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggaaattatacaaaacagtgctttcctgagaggcttgtgtcgtaatagtgcccctgca
gatttacaatacgataactcgtctgaactctttcgtatatccacatatgctaagttccct
gccactgcaccagtgactgaaagaagtctcgctcgagctggcttttattacactggagtg
ggcgaccgtgtccagtgtttccgctgcagtgtgacagcagacaactggaagtctggtgat
tgccctgcagagcgccacaaacagctgtctcccacctgcagcttcatccagagcttaccc
gccacagcaaacctcctgtcgtcctcccactcagccttttccccgcttcgcaatgtagct
atcctgcagctgtccgcccctgcaaccgcagttgcatcaaccacttcagcatcatcttca
ggccaaacagaggaccaggtgggttacctaaatatgggatttagcaacctggcaccctcc
agtcccatttcttcccgtggagtggaggacatgtctcaccagcgaccgccagcttgtcac
aatcccagtatgcgtcgggaacaggagcgacttgacacgtttcaaaattggactcttgct
acagtgacaccaactgagctcgccaaagctggtttttactaccttggccagggcgacagg
gtggcttgcttcagctgtggtggccagctcagcaactggaaaccaggagatcgggcagtt
tctgagcaccagagacattaccccaactgccggtttgttcgaggcgaccgtgcagataat
gtcccattatctggtggcggcctttccaacgtatccaactcagcaatgcaacagtgtgaa
gaacggctgctcacgtttgtcaactggccctcaagaatacctgttcgaccagaccaattg
gctaaagctggtttttactatgttggtcgtaacgatgatgtcaagtgcttttgttgtgat
ggtggactcagatgttgggagtctggtgatgatccatgggttgaacatgctaagtggttt
ccaagatgtgaatacctgttgcaagaaaaaggccaagaatttgttcatcagattcaagca
agatttccaagactttttgaacagctcttgactaatggagaaaacaactcgagagaattt
gttgatccacctgttgtacacctgggtcctggagaagaccgttcagaagatgcagtaatg
atgaacaaccctgttgtaaagtcagcattagaaatgggatttgagcgtaacctggtgaag
caaacagttcaaagcaaaattcttacaagtggagagaattataaaaccgttcaagaactg
gtgtctgacttactaagtgcagaagatgaaaagagagaggaggaacgagaacttcttgct
gaggagatggcctcagatggttttactttccttaagaaacatcatgctgccttgacacag
cgtttaaaaagcgtgcagagcttaatggatcatcttctggaggagaatgtcatctcacag
aaagagtatgacattattcgtaactgcactacggtcaagcagcagacagggcagctgatt
gatttagtcctatcaaaaggaaacgcagcagcagaagttttccgcaactggatcaagaag
aatgacgtgtacctgctgagagaactgatggcccagacaaatgaagctgcatcaccgagt
caagatctttcagacttacctatggaggaacagttgagaagacttcaagaggaacgcaca
tgcaaagtgtgcatggataaggaggtcaacatcgtctttatcccatgtggtcacctagtg
gtatgcaaagagtgtgcgccttctttacggaagtgcccaatttgtagaggattggtcaaa
ggcactgtccgtaccttcctatcataa
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