Labeo rohita (rohu): 127152444
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Entry
127152444 CDS
T09007
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127152444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127152444
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
127152444
Endosome - Golgi transport
Arf GTPase associated proteins
127152444
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
127152444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
ArfGap
PH
PH_6
Motif
Other DBs
NCBI-GeneID:
127152444
NCBI-ProteinID:
XP_050949057
LinkDB
All DBs
Position
21:1348858..1371831
Genome browser
AA seq
997 aa
AA seq
DB search
MCVRGNEFLLILMFSFLPFLVAKLVHYTYLPQMSLSDPPDIIPVPKPRSRYLIGVGVGQP
SSKERNGVGQSPCPDVKADTQTKSKVETDIKHEVSVDASFRLRRSISSPPDPQDVKTSCS
ETVRSPRPLSMYISSSPDAERTADSVFFDDCPMTPDSLSNDHHDSDKASFIDQAIDVQTE
VRTNGEIHQVPKSQKPPNKPNKPNKPRAATIRVSRKKQTLTGPRQKSNASHSECAVAQSS
WLDVWKGRKHNVLWVTLDGHLMSMWKKRTDKFTEYVFHVASITSIREQDQGRFSIYLQKK
HFEFMAHSDAVREGWLNSLYATRGREPITPPKQHGSLIMKDPRKKVYTAIRGHYLWIYSS
KEDFNIGLGMMCVSMNIASVKATGRHSFSLITPYRTFNFSADSAKELGVWLESLNEVIRS
ALSYSEVALRLWSSPCNKVCADCGAANPEWASVNLLVVICEACAGAHRSMGSNRSKVRGL
KLDNKVWTEPLIQLFLLHGNKAASSIWGHNIPPTEQISPVASPDQRMEFILAKYHKGLYR
KAHPLSANQKLLDQRLREVVCGPNVEETLSLLCSGARVSCISTDPKLQSAISVAESAGQG
LQAELLRQNEFVEAPDFEQMIPAEEQIEELHGKLDEERFLFSQENESAACDVLDLKEVIS
VFDYSAGQTHEFEVLSLTDRLICRADGRDALLNHMLHIMKIVLAGAVVDEDLLGVCAVSR
VSIREGAALQCAEVWCTLQDGEMSIHSTQGSTDTVILDSQTRCHLQQSENCILLELPDRT
LHMQFELEHSCLWWHKLLMRAVSSTTDGQKLAGSVPCSIDRCISHITQYGLKVEGLYRRC
GVALQISKLVEALSVSPRGTVLETDELSVVDISGALKQILRQSFELIPNTHKQHWLKAAG
LSNEKQRLQMYRKLLKQLPPDNRATLTALCGHLHVVQMHCQENRMTAHNLAVIFVVTLFQ
ELAMNAALVQLTKELIVYHPEIFMNRVETKREIITVF
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtcagaggaaatgaattcctgttaatcttgatgttttcattcttgccgtttcta
gttgcaaaactcgttcattacacttatttgcctcagatgtctctgtctgatccacctgat
atcatacctgtgccaaagccacgatcaagatatttaatcggagtaggtgtaggacagccg
tcatctaaagaaagaaatggtgttggtcagtctccttgtccagatgttaaagctgataca
cagacaaaatctaaagtagaaaccgatatcaaacatgaggttagcgtggatgcttcattt
agactgcggcgttccatctcttcaccccctgatcctcaagatgttaaaaccagctgcagc
gaaacggttcgatcaccaagaccgctctccatgtatatcagttcatctccagatgcagaa
agaactgctgattcagtcttttttgatgattgccctatgactccagactcgctcagtaat
gatcaccacgattcagacaaagcaagtttcatagatcaggcgattgatgttcagacagaa
gttcgcaccaatggagagatccatcaagttcccaaatcacagaagcctccgaacaaacct
aacaaacccaataaaccacgggctgcaactattcgcgtgagcaggaagaagcagacgtta
acagggccgcggcagaaatccaacgcgtctcacagtgagtgtgcggtggcacaatccagc
tggctggacgtatggaaaggacgcaagcacaatgttctatgggtcactcttgatggacat
ctcatgtcaatgtggaaaaagcgcacagacaagttcacagaatatgtgtttcacgttgca
agcatcaccagcatacgtgagcaggatcaaggacgcttctccatctatttacagaagaag
cactttgaattcatggctcacagtgatgctgtgcgggagggctggttgaattctctctac
gccactcgtgggagggaacccatcactccacccaaacaacacggatcgctgatcatgaaa
gaccctcggaaaaaggtgtacactgctatccgtggacactacctgtggatttacagcagc
aaagaggacttcaatataggccttggcatgatgtgcgtgtctatgaatatagcgtctgtg
aaagcgacagggcgtcacagcttcagtctcattactccatacaggaccttcaatttctct
gcagactctgctaaggagttgggcgtgtggctggagagtctgaatgaagtgatccgcagc
gctctgtcctacagcgaggtggcacttcgactctggtcgagtccctgtaataaagtttgt
gccgactgtggcgctgccaacccggagtgggcgtcagtgaacctgctggtggtcatctgt
gaggcctgcgcaggtgcacatcgatccatgggcagcaacaggtccaaagtgcgaggtctc
aaactagataataaggtttggacagagcctttaattcagttgtttttgctgcatggcaat
aaagctgccagcagcatttggggtcacaacatccctccgacggagcagattagccctgtc
gcctctccagatcagagaatggagtttatcctcgccaaataccacaaaggactctaccgc
aaagctcacccgctctccgcaaaccagaaactacttgaccagaggctgcgtgaggtggtt
tgtggtcctaatgtggaggagacgctgtctctgctgtgctctggagcaagagtttcatgc
atcagcacagatcccaagcttcagtccgccatcagcgtggccgagagtgctggacagggc
ctgcaagctgaattactacgacaaaacgagtttgtggaggcacctgactttgagcaaatg
atacctgcagaggagcagatagaggagctccatggaaagctggatgaggagcgtttcttg
ttctcacaggagaatgagtctgcagcctgtgatgtgctggatttgaaagaggtcatctca
gtgttcgactactctgcagggcaaacgcatgagtttgaggtgttatcgctgacagacaga
ctgatctgcagggcagacggacgggacgccctcctcaatcacatgctgcacatcatgaag
attgtgctggcgggtgccgtcgtggacgaggatctgctgggcgtctgtgccgtgtccaga
gtgtccatacgggagggcgcagcgctgcagtgtgctgaagtgtggtgcaccctacaggac
ggagagatgagcattcactcaacacaaggctccacagacacagtgattctggacagtcag
acacgctgccatctgcagcagtcagagaactgcatcctgctggagcttcctgacaggacg
ttacacatgcagtttgagctggagcacagctgtctgtggtggcataagctcttgatgagg
gccgtgagctcgaccacagacggacagaagcttgcgggatccgtgccctgctctatagac
aggtgtatttctcacatcacacagtatgggttgaaggtggagggtttgtatcggcgctgt
ggtgtcgctcttcagatcagtaaacttgtcgaagctctgagcgtttctcccagaggaaca
gttctggaaacagacgagctctccgtcgtggacatttcaggagctctgaaacagatccta
cggcagagttttgagttaataccaaacacacacaaacagcactggctgaaagccgctggt
ctgtcaaatgaaaaacagagactgcagatgtaccgcaaactgcttaagcagcttcctcca
gacaaccgtgcgactctgaccgctctgtgtggacacctgcatgttgttcagatgcactgt
caggagaaccgcatgacggctcataatctggcagtgatatttgtggtcacgctgttccag
gagctcgccatgaacgcagccttggtacaactcaccaaagagctgatcgtatatcaccct
gagatcttcatgaatcgtgtggagacaaaaagagaaatcatcactgtattctag
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