Labeo rohita (rohu): 127152460
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Entry
127152460 CDS
T09007
Symbol
tcf7
Name
(RefSeq) transcription factor 7 isoform X1
KO
K02620
transcription factor 7
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04310
Wnt signaling pathway
lroh04519
Cadherin signaling
lroh04520
Adherens junction
lroh04916
Melanogenesis
lroh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127152460 (tcf7)
09133 Signaling molecules and interaction
04519 Cadherin signaling
127152460 (tcf7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
127152460 (tcf7)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
127152460 (tcf7)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127152460 (tcf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127152460 (tcf7)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
127152460 (tcf7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127152460
NCBI-ProteinID:
XP_050949085
LinkDB
All DBs
Position
21:complement(1488480..1543408)
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AA seq
369 aa
AA seq
DB search
MPQLNGGGGDDLGANDEMIAFKDEGDHEEKIRESAFTESDLADLKSSLVNESEISQNSNS
AVIRRGQQEDQRIYTDKREHLDDVPKHQDGGMYKAPYSGYPFLMLPEPYLPNGPVSPSSN
KVSVVQQGMHPLTPLLPYDHFNPSPPHIPTDVSQKPGVHRHQSQEISGFYQLPQGQITPS
MNWPNQPVYSLPSCGFRQSFSSSLQSSSSFPRFSHSLMLQSGMHPTGIPHPAIVPPSGKQ
EHDQFDRSIYVKSHPEAKREKEPKKPVIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQ
ILGRRWHALTREEQAKYYELARKERQLHMQLYPSWSARDNYVSASQGKKKRRKRDKQQDS
STDNSLDCS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctgaacggtggagggggagatgatctcggggcgaatgatgagatgatcgcg
tttaaagatgaaggggatcacgaggagaagatccgagagagcgcgttcacggagagcgac
ctggccgatctcaaatcatctctggtcaacgagtccgaaatcagccagaactccaactct
gccgtgatcagaagaggacagcaagaagatcagagaatctacaccgataaacgagaacat
ctggacgacgtgcccaaacatcaagatggtggaatgtataaagcgccgtattctggatac
ccgttcctgatgctgcccgagccgtatctaccgaacggacccgtctcgccatcttccaac
aaagtgtcggtggtccagcaggggatgcatcctctcacgccgctgctgccgtacgatcac
ttcaaccccagtcctccacacattcccacagatgtcagccagaaaccaggtgttcacagg
catcagtcgcaggaaatctccggtttctaccagctgcctcaaggccagatcaccccgtcc
atgaactggcccaatcagcctgtctattctctgccctcctgcggcttcagacagtccttc
tcctccagcctccagagcagctcctcattccccaggttctctcattctctgatgcttcag
tccggcatgcaccctacaggcatcccacaccccgctatagtgcctccttctggcaaacag
gagcacgaccagttcgacaggagcatttatgtcaaatctcatccagaggcgaagcgtgag
aaggagcccaagaagccggtgatcaagaagccgctgaatgcattcatgctgtacatgaag
gagatgcgggctaaagtgatcgccgaatgcacgctgaaggagagcgccgccatcaaccag
atcctgggccgacggtggcacgctctgacccgcgaggaacaggccaagtactatgaactg
gcacggaaggagcggcagcttcacatgcagctttatcccagctggtcggcccgtgacaac
tacgtaagtgcttcacaaggcaaaaagaagcgaaggaaacgagacaagcagcaggactcc
agcacagataactctcttgactgttcctag
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