KEGG   Labeo rohita (rohu): 127152548
Entry
127152548         CDS       T09007                                 
Symbol
cul5b
Name
(RefSeq) cullin-5 isoform X1
  KO
K10612  cullin 5
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    127152548 (cul5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lroh04121]
    127152548 (cul5b)
   03400 DNA repair and recombination proteins [BR:lroh03400]
    127152548 (cul5b)
Ubiquitin system [BR:lroh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     127152548 (cul5b)
DNA repair and recombination proteins [BR:lroh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     127152548 (cul5b)
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8
Other DBs
NCBI-GeneID: 127152548
NCBI-ProteinID: XP_050949238
LinkDB
Position
21:complement(16677519..16691345)
AA seq 795 aa
MATSNLLKNKGSLQFEDKWDLMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAK
IHQALKEDILDFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCKLEITLLG
NQGSNKKSNVEDSIVRKLMLDTWNESIFCNIKNRLQDSAMKLVHAERLGEAFDSQLVIGV
RESYVNLCSNADDKLQIYRENFEKAYLDSTERFYKTQAPSYLQQNGVQNYMKYADGKLRE
EEKRALRYLETRRECNSVQALMECCVNALVTSFKETILAECPGMIKRNETESEYGRSSGT
KGSASSELHLMFSLMDKVPSGIEPMLKDLEDHIMSAGLADMVASAETITTDSEKYVEQLL
TLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCP
ELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILD
ISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQSFKEMHKHNKLALPADS
VNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFK
NEVGQYDLEVTTFQLAVLFAWNQRPRERISFENLKLATELPDAELRRTLWSLVAFPKLKR
QVLSYEPVVGSPKDFAEGTVFYINQEFSLIKNSKVQKRGKINLIGRLQLTTERMREEENE
GIVQLRILRTQEAIIQIMKMRKRISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKY
IKRDETDINTFIYMA
NT seq 2388 nt   +upstreamnt  +downstreamnt
atggcgacgtctaatttattgaagaataaaggctccctgcagtttgaagacaaatgggat
ttgatgcggcccattgttttgaagttactccgtcaggagtcagttactaagcagcagtgg
ttcgatttgttctctgacgtccatgcggtgtgtttatgggacgacaaaggcccggctaag
attcaccaggcactaaaagaagacatcctagatttcatcaagcaagcacaggcgcgagta
ctcagtcatcaggatgacacggcattgcttaaagcttacatcgtggagtggaggaagttc
ttcacacagtgtgatattctacctaagcccttctgcaagttggaaatcacccttctgggc
aaccaggggagcaataagaagtccaacgttgaagacagtattgttagaaagcttatgctg
gacacgtggaacgaatctatattttgtaatataaagaaccggctccaggacagtgccatg
aaactggtccatgctgagagattaggagaagcgttcgactcacagcttgtcatcggagtg
cgggagtcatatgtgaatctgtgttccaatgctgatgacaagctccagatctatagagag
aattttgagaaggcgtatctggattccaccgagaggttctacaagacacaagcaccttcc
tatctgcaacagaacggcgttcagaactatatgaaatatgcagatggcaagttacgagaa
gaggagaagcgtgcacttcgatatctggaaaccagacgtgaatgtaactccgtccaggca
ctaatggagtgttgtgtgaatgcgctggtgacgtcgttcaaagaaacaatcctggccgag
tgtccgggaatgatcaagcggaacgagacagagagtgagtacggcaggagctctggcacc
aaaggctcagcaagttcagagctgcaccttatgttctcgctgatggacaaagtgcccagt
gggattgagcctatgctaaaggacctggaggatcatattatgagcgcaggtctggctgat
atggtggcctcagcggaaaccattaccacagactctgaaaagtatgttgagcagcttcta
accttgtttaaccgctttagtaaattagttaaggaagcattccaagatgatccacgtttc
ctaacagccagggataaagcatacaaagctgtagtgaatgacgccacaatatttaaacta
gaactccctctaaaacagaaaggtgtgggtctgaaaacacaaccagagtccaaatgtcca
gagctgctggccaactactgtgatatgctccttagaaagaccccactgagcaagaaactc
acctcagaggagatagaggctaagctgaaggaagtgctcttggttctaaagtatgttcaa
aacaaagatgtcttcatgaggtaccacaaagcgcacttgacccgcaggcttattcttgac
atttctgccgatagtgagattgaagagaacatggtggagtggctaagggaggttggcatg
cctgcggattacgtgaacaagctcgccagaatgttccaggacatcaaagtatcagaagac
ttaaatcaatccttcaaagaaatgcacaaacacaacaaacttgcattgccagctgactca
gtcaatataaagatcttgaatgcaggagcatggtctcggagttcagagaaagtgtttgta
tccctgcccaccgaactagaagatctcattcctgaagttgaggagttttacaagaaaaat
cacagtggcagaaaattacactggcaccatttgatgtccaatggcattatcacatttaag
aatgaagttgggcagtatgatttagaagtcacgacatttcagttagcagtgctgtttgcc
tggaaccaaaggcccagagagaggatcagctttgagaatctgaaactggccacggagctt
ccagacgccgagctgcggcggactctctggtctcttgtagctttccctaaactaaagcgt
caggtgctgtcatatgaacctgtggtgggctctcctaaagactttgcggaaggcactgta
ttttacatcaatcaagagttttctttaataaaaaactcaaaagtccaaaaaagagggaag
atcaatttgattggtcgattacaactcacaacagagagaatgcgtgaagaagaaaacgag
ggcatagtgcaacttaggatattacgcacacaggaagctatcattcagatcatgaagatg
aggaagaggatcagcaatgcccagcttcagacggagctggtggagatcctaaagaacatg
tttctgccccagaaaaagatgatcaaagagcagatcgagtggctgatagaacacaaatac
atcaaacgggacgagacggacattaacacatttatctacatggcgtag

DBGET integrated database retrieval system