Labeo rohita (rohu): 127152585
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Entry
127152585 CDS
T09007
Symbol
ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127152585 (ncstn)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
127152585
NCBI-ProteinID:
XP_050949290
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Position
2:complement(38691644..38707015)
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AA seq
712 aa
AA seq
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MRKMEHLTSINCVKLLIVALFYTCVSSSSVEQKIYVELNNTVPCVRLLNATHQIGCQSSI
SGDTGVLHVLETESDLDWILSTGPHPPYMVILETAFFNRSVMMRMKNSSRVAGVAVIVSK
TGVADNFSPHTTCPNQNTGVYSEKNAPELANCNVTVWNPLGNGLSYEDFAFPVFALKDEN
QTQVIRKCYEDHNLRVNGSAPQYPLCAMQLFSHMHAVTDTVTCMRRTDLQNRFSINPEVL
CDPLSDFNVWTSTRPLNSSSKGHAPNESVVIAATRLDGRSFFWEQAPAAEGTVSGIVTLL
AAIQALYPVTQEAPPPRNIFFTFFQGEAFDYIGSSKMVYDMEKNDFVINLNNVHSMLEIG
QIGLRQGKNLWMHSDPVSRRNTSVDAEVSALMKNLNTASAGLNVTLDQPSFSQPLPPSSF
QRFLRARQIPGLVLADHEMSFNNRHYESMYDDAENMNVTYPPNLSPDEQLVYETEAAKSL
AEVATLVARSLYMQAGGENKSLSSITADPKIVAQLLYGFLVQKNNSWFRSLLPPEVTKKG
DNSILSSGPPQFYIGLGPRIHGPVHSVTRFVQYILANLTGSVTNLTESECQNPSEVHTEN
KDFFSYFWVSGPASVNGTEEPFCVRASVRLSKAVSPAFELLQYGSRDYSTWTESRWKSIR
ARIFLVASRELEMLTLGVGVAVLLLSLLVTYFISSKAELLFSSARETPTTTY
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagatggaacatttaacatcaataaactgcgttaaacttctgatcgtcgcttta
ttttacacatgtgtgtcgtccagctcagtggaacagaagatctatgttgagctcaacaat
acggttccatgtgtccgattgctgaacgccacccatcagatcggctgccagtcatctata
tcaggagacacgggcgtccttcatgtgctggagaccgaatcagacctggactggattctc
agcacaggaccgcatcctccgtacatggtgatcttggagacggccttcttcaacaggtca
gtcatgatgaggatgaagaactcatccagagtggctggagttgctgtgatcgtctcaaaa
acaggcgttgctgataatttctcgcctcacacgacctgccccaaccagaacacaggtgtg
tattcagagaaaaacgcccctgagctggcgaactgtaacgtgaccgtgtggaatcctttg
gggaacggactgtcctatgaagacttcgctttccctgtgtttgctctgaaagatgagaat
cagactcaggtcatccgtaagtgttatgaggatcataacctgcgtgtgaacggaagcgct
cctcagtatccgctgtgtgccatgcagctcttctcacacatgcacgccgtgaccgacact
gtgacgtgcatgagacgcacagacctgcagaacagattcagcatcaacccagaggtcctg
tgtgacccgttgagcgattttaacgtctggacgtccactcggcccctcaacagcagctcc
aagggccacgcgccgaacgagagcgtcgtcatcgcagcgacacggctggacggtaggtca
tttttctgggaacaggctccggcggccgaaggcaccgtttctggtatcgtcaccctattg
gccgccattcaagcgctgtatcctgtcactcaggaagctccgccccctcgcaatatcttc
ttcaccttcttccaaggggaagcctttgactacattggcagctcaaaaatggtgtacgac
atggaaaaaaatgactttgttatcaatttgaacaatgtgcactccatgctggaaattggg
cagatcggtctgcgccaggggaagaacctctggatgcactctgaccccgtgtcccgccgc
aacacgagcgtggatgcagaggtgtctgctttgatgaagaatctgaatactgcttctgct
ggtctgaatgtcacattggatcagccgtcgttcagtcagccgctgccgccctcatctttc
cagcgcttcctgcgggccagacagatcccaggcctcgtgctggcagaccatgagatgtca
ttcaacaacagacactatgagagtatgtacgacgacgcagagaacatgaacgtcacatat
ccgcccaacctgagtccagacgagcagctggtgtacgagactgaagcggccaagtctctg
gctgaagtggccacgctggtcgctcgctcactttacatgcaggcaggaggagaaaacaaa
agcctgagcagcatcaccgccgaccccaagattgtcgctcagttgctgtatggttttcta
gttcagaagaataacagctggtttcggtctctgctgcctcctgaagtcaccaagaaagga
gacaacagcattttaagttctggtcctcctcagttctacatcggtctcggtcctcgcatc
cacggccccgttcacagtgtcacacgcttcgttcagtacattctggctaatctgacggga
agcgtcaccaacctcacagagagcgagtgccagaatcccagcgaggtccacactgagaac
aaagactttttctcgtatttctgggtgtcgggtccggcgtcggtgaacggcacagaagag
ccgttctgcgtgcgggcgtctgtgcgtctgtccaaagccgtctctcctgccttcgagctg
ctgcagtacggctctcgagattactccacatggacagagtctcgctggaagagcatccga
gcgcgcatctttctggtggccagcagagaactcgagatgttaacactgggggtgggcgtg
gccgtgctgctgctgtctctattggtgacgtacttcatcagctctaaggcggagcttctg
tttagctccgcccgtgaaacgcccactacgacctactga
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