Labeo rohita (rohu): 127152634
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Entry
127152634 CDS
T09007
Symbol
skp2
Name
(RefSeq) LOW QUALITY PROTEIN: S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04068
FoxO signaling pathway
lroh04110
Cell cycle
lroh04120
Ubiquitin mediated proteolysis
lroh04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127152634 (skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
127152634 (skp2)
04150 mTOR signaling pathway
127152634 (skp2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127152634 (skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127152634 (skp2)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127152634 (skp2)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
LRR_4
LRR_R13L1-DRL21
LRR_NXF1-5
LRR_FBXL18
LRR_8
Integrase_Zn
Motif
Other DBs
NCBI-GeneID:
127152634
NCBI-ProteinID:
XP_050949373
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Position
21:16533006..16549791
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AA seq
410 aa
AA seq
DB search
MSNERAFQELSENLEGSLYRPQRSKWKRRPSCSGGLDTENTPNELIQQWSPPHKKILTSA
KGKENEENVFVLARRPRKRRESTAGLCWDSLPDELLLGILSRLSLQDLLRTSRVCKRWHR
LAFDESLWHSVDLVGKAQLDAELGQVLSAGALRLRCPHTCIGQPSFKSAQKLRIQHLDLS
NCTVQTSVLEDILSRCKHLQNLSLEGLVLSDSIIHSLAQNTEIVRLNLCGCSGFSPESLT
EMLKSCTRIEEMNVSWCDFNNLHVQAIASNVPSSITQLNISGYRQNLTMEDVKAIVKTCP
NLSNLDLSDSVLVTTDSFPVLEQLSSLKHLGLSRCYQIHPASLIDFEKFPNLQTLEVFGL
IQDSYLPILCKGLPHIQINTQPFSTVARPTSASKKDRTIWGMHCRLVYKH
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgaaagagcgtttcaagaactgagtgagaatttggagggatccctgtacagg
cctcagaggagtaaatggaaaaggcggccctcctgcagtgggggtctagacactgaaaac
acgccaaacgagctcatccagcagtggtcacccccacacaaaaagatactgacttctgca
aaagggaaagagaatgaagaaaacgtatttgttcttgccagacgtcccaggaaaagaaga
gaatcaacagcaggattgtgttgggacagtcttcctgatgagctgttgctgggaatcctg
tctcgtctctcactgcaagatcttctccggacgtcacgggtctgcaagcgctggcatcgt
ttagcgtttgatgagtctctgtggcacagtgtggacttggtgggaaaggctcagttagat
gcagagcttgggcaggttctctcagctggagcattgaggctgcgctgcccgcacacctgc
atcggtcaacccagttttaaaagtgcacagaaacttcgtatccagcatctggatttatca
aactgcacagtgcagacatctgttctcgaagacatcctctctcgctgcaaacatctgcag
aatctcagtctcgaaggattggtgctctctgatagcattattcattctctggcccaaaat
actgaaattgtccgactgaatttgtgtggctgttcaggcttctcccctgaatcgttgact
gagatgttgaaatcttgcactcgaattgaagaaatgaatgtgtcatggtgtgacttcaat
aatctccatgttcaagctattgctagcaacgttccctccagcatcactcaactgaacatc
agtggttatagacaaaacctcactatggaagatgttaaagctatagtaaaaacatgtccg
aacctttcaaatctagatttgagtgacagcgtgcttgtgacgacagacagtttcccagtc
ctagagcaactttcctccttgaaacatctggggctgagccgctgttatcagatccaccca
gcttctctcattgactttgaaaagtttccaaatttgcaaaccctggaggtcttcgggctc
atacaggacagctacctccccattctttgtaaaggtctaccgcacatacagatcaacaca
caaccgttttccactgtggcacgtcccacctcagcatcaaaaaaggatcgcacaatttgg
ggaatgcactgccgacttgtgtacaaacattga
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