KEGG   Labeo rohita (rohu): 127152642
Entry
127152642         CDS       T09007                                 
Name
(RefSeq) collagen alpha-1(XXIII) chain
  KO
K24355  collagen type XXIII alpha
Organism
lroh  Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:lroh00536]
    127152642
Glycosaminoglycan binding proteins [BR:lroh00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   127152642
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 127152642
NCBI-ProteinID: XP_050949382
LinkDB
Position
21:10108263..10211062
AA seq 566 aa
MPKMVSTGDSKDVSKTSRCSGHHTSQIFHCLTTLVCFMLSASSVAVCLFMNVKTSHLERK
IELLEMERLSVIQPVHSTLDAHSTLRDAIDKLVQERLKEGVSKIRTAREAAQECSCPPGP
PGKRGRKGNPGIPGTPGRDGYPGPMGMDGKPGPPGPNGSQGMPGLKGDKGDQGDMGPRGP
PAYAASAGLLSNQILTVKGDQGQAGPPGPPGPPGTPGPRGPPGNTGRDGPQGHPGEPGPP
GKDGNEGPRGPPGMQGMNGVNGMPGPQGPVGQKGDKGAPGTEGKRGIDGSPGMKGEKGDV
GDPGPQGLPGEKGATDFTENADLAVRLKTLQGPPGPPGPPGEQGPKGEMGLHGPPGPEGK
QGHKGERGDTGEPGAAGAKGEKGDIGLTGPSGETGQKGDKGDSRLEDNLAQIISLPGPPG
PPGPPGPAGFHGLPGHKGEPGEAVKGEKGEAGEKGPPGQRGLQGFPGSNGLVGLPGAKGE
KGKQGEPGLDGFPGLQGEKGDRGDKGEKGERGTIGKKGLKGQKGEQGPPGLDQPCPVGRD
GLPIPGCWHKEEASGQGDKAKHPSQP
NT seq 1701 nt   +upstreamnt  +downstreamnt
atgccaaaaatggtttcgactggggattcaaaagatgtgtcaaagacatcacggtgcagt
ggacatcacacatcacaaatattccattgtttaacaaccctcgtttgttttatgctgtcg
gcgtcttcggtggcagtttgtctgtttatgaacgtcaaaacatctcatcttgagcgtaaa
attgaacttctggagatggagcgactgtctgtgattcaacctgtgcactccacactggat
gcgcactcgactcttcgggatgcgatagacaaacttgtgcaagagagacttaaagagggg
gtgtcgaaaattcgcacagctcgagaagcagcgcaagagtgctcgtgtcctccaggtcct
ccaggaaaacggggaagaaaaggcaaccctggaattccaggcactccaggacgagatggc
tacccgggtccaatgggtatggatggtaagcctggacctccaggtccaaacggcagtcag
ggaatgccagggctgaaaggagataagggtgaccagggagacatgggtcccaggggacca
ccggcctacgctgcctctgcaggcctgctcagtaatcagattctcacggttaagggtgat
caaggtcaggctgggcccccgggtcccccaggacctccaggaacacctggtcccagaggg
cctccaggaaacacaggcagagatgggccgcagggccacccaggagagccgggtcctcct
ggaaaagatggaaatgaggggccgagagggccacctggcatgcagggtatgaatggtgtc
aatggcatgcctggcccacagggccctgttgggcaaaagggcgataagggcgctccaggt
actgaggggaagagagggattgatggatccccaggcatgaagggtgaaaagggggatgtt
ggagatccaggaccccagggtttgcctggagagaaaggagctactgactttacagaaaat
gctgatctggctgttagactcaaaactctacaggggcctccaggccctccaggacctcca
ggggagcaagggccaaaaggagaaatgggcttacatggaccaccaggacctgaaggaaag
cagggccataagggagagagaggtgatacaggagagcctggagcagcaggagcaaaaggg
gaaaagggggacattgggctgacagggccttcaggggaaacagggcaaaagggcgataaa
ggagactctaggcttgaggacaatctggcacagattatctctttgcctggcccaccaggg
ccacctggaccccctggacctgcaggatttcatggattgcctggacacaagggagagcct
ggtgaggcagtcaaaggcgaaaaaggtgaagctggagagaaaggtccacctgggcagcgg
ggtcttcaaggctttccagggtcaaatggcttggtaggcttgccaggtgcaaaaggtgaa
aaggggaaacaaggtgaaccaggtttagatggtttcccagggcttcaaggagaaaagggg
gacagaggagacaagggggagaagggtgagagaggcacaataggaaaaaaaggtctgaaa
ggacagaagggagagcagggacctccagggcttgatcagccttgtcctgtggggcgcgat
gggctgcccataccaggatgctggcataaggaagaggcttcagggcagggtgacaaagcc
aagcacccatctcagccctaa

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