Labeo rohita (rohu): 127152644
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Entry
127152644 CDS
T09007
Symbol
uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127152644 (uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127152644 (uimc1)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
127152644 (uimc1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
UIM_2
Motif
Other DBs
NCBI-GeneID:
127152644
NCBI-ProteinID:
XP_050949384
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All DBs
Position
21:6901617..6915273
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AA seq
936 aa
AA seq
DB search
MPRRKRTSDEGGRRAKVSRVEHNEETLVISDSEHEEEEDCSFKRSSRTARWRRRENESNL
REMTEEEMLDLAMKLSAQEANSAAQRQKLEDNDIQKAIAESLNESTVKASEDQDEAASSS
NQPQQNVTNPMLRRRKLSYHSQDQTHSDNEREPTSPLPEMPDLSQTTSSHLSTTGSPAQV
SSPPAATQDKASDKQTVVSNTPELFRSISESQSQTSPAFTRHGSLIRQPVVCVEKLSQDL
ILASRDSNFHTQDSAAASICVDRSPSPKQEDSPFSKCPVFTQNNLKTDLLEDKDGRKNAN
ASEDYTQISGEDTNLPTQVSQGLSTDPDTCLSPSGRSKQSSPKCVPKNSNEDVTVPGKTT
KLKQVEDQTTRGENVKSDKETVPKTQSWNEFTTHMVLHLTDDDEDDGSEEALPPSPVLCK
EKIFKPIKTELSPTQSCTSPATVTLCPSIQDTQMSQSVLEEDLKASKVVEFKSSDCKPPH
TSVKKEECTVSYYWGVPFCPMGQNPDEYTRVILCQMEVYEKSLKEAQRELLRKVDWGQPV
CPSTSERPFGARRWKRHRAPQLSEDEEENEEEGEKENNRIDVEEEKVEAKEGSVVGSQED
AEGRQSETYVVLSSPETKDDQVEDAEGRQSETYVVLSSPETKDDQVEKSPYFSQEEPVTA
TLNKPFRKNAPWDISGETQIQCSAEQEEEEAQNHEHCEEDEIICPETQMTQTSTPELMVT
SPAQPQSRADSEVMEVEEGGGAPAMEEEMMEQESGPAEAASLHNQRMECPMCSKFFPLHR
IEVHAALCDGEVDHQEEQSQVVARRKRTRRNLTQETMRSGKSTQGFFSAQEYSEHVDLCI
EKKESKTNQENGLLSALDRKERRHTGTDEPGPSDVSTTSNCGLADPAVMGSSQSVDCTAM
TSCPRNTFTPQSENTDCLIDSSKNSQRLSRKRKYKK
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgccccgccggaagcgcacatcggatgaaggcggaagaagagcgaaagtcagcagagtg
gagcacaatgaagagaccctggtcatatctgattccgaacatgaagaggaggaagattgc
tcatttaaacggtcctctcggacagcccggtggagacgaagggagaatgagtctaatcta
cgagagatgacagaagaagagatgctggacctggccatgaaactgagtgctcaggaagca
aacagtgctgcccagagacaaaagctggaagacaacgacatacaaaaagccatagcggaa
agtcttaatgaaagcactgtaaaagcatcggaggatcaagatgaagcagccagctcttca
aatcaaccacagcagaacgtaacaaatccgatgttacgcagacgaaaactgtcataccac
agccaagatcagacacacagtgacaatgagagggaaccgactagtccgctgccagaaatg
cctgatctatcacagacgacctcctcgcatctttcaacgacgggctctccagctcaggtc
tccagtcctcctgctgccactcaggacaaggcttcagataaacagacagtcgtcagcaac
actcctgaactcttcagatctatctcagagtcccaatcccagacatcccctgccttcacc
aggcatggcagcttaattcgccagcctgtagtatgtgttgagaaactgagtcaggacctc
atcctggcaagcagagactcaaactttcacacgcaggacagcgctgccgcttccatttgc
gttgacagatctccatcccccaagcaggaagattcgcccttttccaaatgtccagtcttc
actcagaacaatctaaaaactgatttgctagaggacaaagacggccgtaaaaatgctaac
gcaagtgaagactatactcaaatatctggtgaagatactaatttaccaacacaagtaagc
caaggtttgagcacagatccagatacgtgcctttcaccttctggaagatccaagcaatca
agccctaaatgtgtgcctaaaaacagcaatgaagatgtcactgtaccaggtaaaaccact
aaactaaagcaagtagaggatcagaccactcggggtgagaatgtaaaatctgacaaagaa
actgttccaaaaactcagtcttggaatgaatttactactcacatggtcttgcatttaaca
gatgatgatgaagatgatggcagcgaagaggctcttccccccagtccagtcttgtgcaag
gagaaaatttttaagccaatcaagactgagctttccccaacgcagtcctgcacctcacca
gctaccgtcacactctgtccttctatacaagatacacagatgtctcagtctgtcctggag
gaggacttaaaagcatccaaagttgtggaattcaaatcttccgactgtaaacctccccat
acttcagtgaaaaaagaagaatgcactgtctcttactactggggagtgcctttctgcccc
atggggcaaaacccggacgagtacacacgtgtcatcttgtgtcaaatggaggtgtacgag
aagagcctgaaggaggcccagcgagagctgctgcgcaaagtagactggggacagccagtg
tgtcctagcacatcagagaggccgtttggtgcacggagatggaagcgccacagagctcct
cagctgtcagaggatgaggaagagaatgaagaagagggagagaaagaaaataacagaata
gatgtagaagaagagaaggttgaagccaaggaaggctctgtggtggggtcacaggaagat
gctgagggcagacaaagtgaaacatatgtagttttgtcttctccagagacaaaagatgat
caagtggaagatgctgagggcagacaaagtgaaacatatgtagttttgtcttctccagag
acaaaagatgatcaagtggaaaaaagcccttactttagccaagaggagcctgtaactgcc
actttaaataaacctttcaggaaaaatgctccatgggatatctcaggtgaaactcaaata
cagtgttcagctgagcaggaggaagaggaggcccagaatcacgagcattgtgaagaggat
gagatcatttgtccagagactcagatgactcaaaccagcacaccagaactaatggtgacc
agtcctgcacagccccagtctcgcgctgacagcgaggtgatggaggtagaggagggagga
ggtgctcctgccatggaagaggagatgatggaacaagagagtggtccagcagaggcagct
tctcttcacaatcagaggatggaatgccccatgtgctccaaattctttcccctccacagg
atagaggtgcacgcggctttatgtgatggtgaagtagatcaccaagaagaacaatcccaa
gttgttgccagaaggaaaaggaccagaagaaatttgacacaggaaactatgcgatctggc
aaatcaacgcagggttttttttcagcccaggagtattcagaacatgtcgatttgtgcatt
gaaaagaaagaatcaaaaacaaatcaggaaaacggcctgctttctgctctggatcgaaaa
gaacggagacatactggcactgatgaacctggaccatctgatgtttctacaacgagcaac
tgtggtcttgccgatccggctgtgatggggtcttctcaaagtgtagattgcacagcaatg
acttcctgtcccagaaacactttcactcctcaatcagagaacactgactgccttattgac
tcctcgaagaacagccaaagactctcaagaaagagaaaatataaaaaatag
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