Labeo rohita (rohu): 127152773
Help
Entry
127152773 CDS
T09007
Name
(RefSeq) synaptic vesicle glycoprotein 2C
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127152773
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lroh02000
]
127152773
Transporters [BR:
lroh02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
127152773
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LD_SV2
MFS_1
Sugar_tr
MFS_2
Pentapeptide_4
Pentapeptide_3
DUF6077
Motif
Other DBs
NCBI-GeneID:
127152773
NCBI-ProteinID:
XP_050949574
LinkDB
All DBs
Position
21:complement(28985145..29054819)
Genome browser
AA seq
731 aa
AA seq
DB search
MEDPYRDRTSLAKGARDIAKEAKRHAVKKVNKVVDRASDEYSGRNYSRFENDEDEGADED
GYYYQDGQAQREDDEGSSDATEGHDDEDEIYEGEYQGVPAGGGAADGRGQVAIGQPLADG
MKDKRELEKEREADEEELAQQYELIIQECGHGRFQWQLFFVLGLALMSDGVEVFVVGFVL
PSAETDMCVPNSGAGWLGSVVYLGMMVGAFFWGGLSDKVGRRQCLLVCMSVNGFFAFLSS
FVQGYSTFLFCRMLSGFGIGGAVPIVFSYFAEFLAREKRGEHLSWLCMFWMVGGIYASAM
AWAIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVSAVVALTFMPESPRFYLEMGKHDEA
WMVLKQIHDTNMRARGEPEKVFTVNRIKIPKQLDELVEMQSESANPVAKVLFRIKSELRG
IWLTFLKCWDYPVKDNTVKLAIVWFSLSFGYYGLSVWFPDVIKHLQADEYASRVKIHNNE
RIEDFTFNFTLENQIHKNGVFINDRFIGMKFKSVTFIDSTFQSCYFEDVSSIGSFFKNCT
IIEAFFYNTDIDDSKFIGSSLINSTFAHNKTGCQMTFDDDYSAYWVYFINFLGTLAVLPG
NIVSALLMDKVGRLSMLGGSMVLSGISCFFLWFGTSESMMIAMLCLYNGLSISAWNSLDV
VTAELYPTNRRGTGFGFCNAMCKLAAVLGNLIFGSLVGITKSIPILLASSVLVAGGLVGL
RLPDTRSNVLM
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaggacccgtacagagacaggacgtctctggccaaaggcgctcgagacatcgccaag
gaggcgaaacgccacgcggtcaagaaggtcaacaaagtggtggaccgcgcctcggacgaa
tactccggccgcaactacagccgcttcgaaaacgacgaagacgagggcgccgacgaagac
ggttactactatcaggacggacaagctcagcgagaagatgacgaggggtccagcgacgcc
accgagggccacgacgacgaggacgaaatatacgagggcgagtaccagggcgtgcccgca
gggggcggggccgcagatgggcgtggccaggtggcgattggccagccgttggcggatgga
atgaaggacaagcgagagctggagaaggagagagaggcggatgaggaggagctggcgcag
cagtacgagctcatcattcaggagtgtggacacggacgcttccagtggcagctgttcttc
gtgttgggcctggcgctcatgtccgacggggtggaggtgttcgtcgtggggtttgtgctg
cccagtgctgagacggacatgtgtgtgcccaactcaggagccgggtggctgggcagtgtg
gtgtatctgggaatgatggtgggcgcgttcttctggggcggcctgtcagataaggtgggc
cgacggcagtgtctgctggtgtgtatgtcagtcaacggcttcttcgccttcctgtcgtcc
ttcgttcagggctacagcaccttcctcttctgcaggatgctctcggggtttgggattggt
ggagcggttcccatcgtgttctcgtactttgccgagttcctggcgcgtgagaaacgcggt
gaacacctgagctggctctgcatgttctggatggtgggcgggatctacgcttcagccatg
gcctgggccatcattccacactatggctggagtttcagcatgggttcagcgtatcagttc
cacagctggcgtgtgtttgtggtcgtctgcgcgctgccctgcgtctctgcggtcgtggcg
ctcacgttcatgccagagagtccacgcttctacctggagatgggaaagcatgacgaggcg
tggatggttctcaaacagattcatgacaccaacatgcgtgcgcgcggagagcccgagaaa
gtctttactgtgaaccgtataaagatccccaagcagctggatgagctggtggagatgcag
tcggagtcggcaaacccagtggccaaagtcttattcaggatcaagagcgaactgcgcgga
atctggctcacgttcctgaagtgctgggattaccccgtcaaggacaacactgtgaagttg
gccatagtttggttctcgctgtcgttcgggtactatggtctgtctgtctggttccctgac
gtcataaagcacctgcaggcggatgagtacgcgtcccgtgtgaagatccacaacaacgag
agaatcgaagacttcacctttaattttaccctggagaaccagatccataaaaatggagtg
tttattaatgacagattcattggcatgaagtttaagtctgtgactttcatcgactccacc
tttcagagctgttattttgaggatgtcagttccatcggttccttcttcaagaactgcacc
atcatagaagcgttcttctataatacagatatcgacgactcaaaattcatcggctcctct
ctgatcaactccacgtttgcgcacaacaagaccggctgtcagatgacgtttgatgacgac
tacagcgcgtactgggtgtatttcatcaacttcctcggaacgctagccgtgttgccaggc
aacatagtctccgccctcctcatggataaagtgggccgtttaagcatgttaggtggctcg
atggtgttatccggcatcagttgtttctttctgtggttcggcaccagtgagtccatgatg
atagccatgctctgcctttataacggactcagtatatcagcttggaactcactggacgtg
gtgacggccgaactgtatcccaccaacaggagagggactggctttggcttttgtaatgcc
atgtgtaagctggccgcggtcttggggaatctaatatttgggtcgttggtgggaatcaca
aaatccatcccgatcctgctggcatcatctgtgctggtcgccggaggcctggtgggtctg
cggctccccgacacccgctccaacgtcctcatgtga
DBGET
integrated database retrieval system
