Labeo rohita (rohu): 127152823
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Entry
127152823 CDS
T09007
Name
(RefSeq) claudin-3 isoform X1
KO
K06087
claudin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03272
Virion - Hepatitis viruses
lroh04382
Cornified envelope formation
lroh04514
Cell adhesion molecules
lroh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
127152823
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127152823
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127152823
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127152823
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lroh03037
]
127152823
04147 Exosome [BR:
lroh04147
]
127152823
04515 Cell adhesion molecules [BR:
lroh04515
]
127152823
Cilium and associated proteins [BR:
lroh03037
]
Other cilia and associated proteins
Stereociliary proteins
127152823
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
127152823
Exosomal proteins of colorectal cancer cells
127152823
Cell adhesion molecules [BR:
lroh04515
]
Immunoglobulin superfamily
L1 family
127152823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF4064
TMEM37
Phage_holin_3_6
NADHdh-2_N
TMEM_230_134
Motif
Other DBs
NCBI-GeneID:
127152823
NCBI-ProteinID:
XP_050949630
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All DBs
Position
21:13919352..13925932
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AA seq
214 aa
AA seq
DB search
MSMGMELGGIALGIIGWIISIVACALPMWRVSAFVGANIVTAQVIWEGLWMNCVVQSTGQ
MQCKVYDSMLALSQDLQASRAMSVVAIILAILGVLISIMGAKCTNCIEDEASKAKVMIVS
GVMFIIAGVLVLIPAAWVANQTIRDFYNPLLTTAQQRELGASIYIGFAAAALLLIGGALL
CCTCPPREKKYKPPRMGYSAPRSVSGGYDRKDYV
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgggaatggagcttgggggcattgcccttggcatcattggctggatcattagt
attgtcgcttgcgctcttccaatgtggcgtgtctcggccttcgtgggcgcaaacatcgtc
acggcacaagtcatctgggaaggtttatggatgaattgtgttgtccagagcaccggacag
atgcaatgcaaggtctacgactctatgcttgctctatcgcaggatctccaggcttccagg
gccatgtcggtcgtcgccatcatcttggccatcctgggcgtgttgatctccatcatgggc
gccaaatgcaccaactgtatcgaggatgaagcatccaaggctaaagtgatgatcgtctcc
ggcgtgatgttcattattgccggcgtcctggtgctcattccggcggcctgggtggcaaac
caaaccattcgggacttctacaacccattactgaccaccgctcagcaaagagagcttggg
gcatccatctacatagggtttgccgctgctgctctgctgctgatcggaggagcgttgctg
tgctgcacctgtcctccacgggagaagaagtacaagccaccaagaatgggctactctgct
ccacgctccgtcagtggtggatatgacaggaaggactatgtttaa
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