Labeo rohita (rohu): 127153046
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Entry
127153046 CDS
T09007
Name
(RefSeq) pulmonary surfactant-associated protein D-like
KO
K03991
mannose-binding lectin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127153046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127153046
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lroh04091
]
127153046
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Phagocytosis
Opsonins
127153046
Lectins [BR:
lroh04091
]
C-Type lectins
Group 3: Collectins
127153046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Collagen
Motif
Other DBs
NCBI-GeneID:
127153046
NCBI-ProteinID:
XP_050949959
LinkDB
All DBs
Position
2:complement(27027664..27029937)
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AA seq
253 aa
AA seq
DB search
MALLKLFLIALLLLQFALQLLDGAEPQNPNCPAYGGVPGTPGHNGLPGRDGRDGKDGAIG
PKGEKGEPGVNVQGPPGKLGPPGEKGERGPPGPQGSPGRESVPESLKSEIQQLKAKTAMF
EKVASVSHFRRVGEKYYITDGGVGNFDQGLKYCKDFGGTMVLPRTSAENQALLKLVVSSG
LSSKKPYIGVTDRETEGRMVNTEGNPLTYTNWGPGQPDDYKGLQDCGVIEDSGRWDDGSC
GDIRPIMCEIDNK
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttaaagctcttcctcatagctcttctgctccttcagtttgcgctgcagctg
ttggatggagctgaacctcagaacccaaactgtcctgcatatggtggagttcctggcact
cctggacacaatggtctgcctggaagagatgggagagatggtaaagatggagccattgga
cccaaaggagagaagggagagccaggagtgaatgttcagggacccccaggtaaactggga
ccacctggagaaaaaggtgaaaggggacccccaggtccacaagggtctcctggaagagaa
agcgttcctgaatccctgaaatctgagatccagcaacttaaagccaagactgccatgttt
gagaaagttgcaagtgtcagccacttcaggcgagttggagagaaatactacatcactgat
ggtggtgtggggaattttgatcaaggtttaaaatactgcaaggattttggtggaacaatg
gttttgccaagaacttctgcagaaaaccaagcattactgaaattagtagtatccagtggt
ttaagtagtaagaagccatatattggagtcacggacagagaaacagagggacggatggtg
aacactgaggggaatccattgacttataccaactggggtccgggtcagcctgatgactat
aagggactgcaagactgtggtgttatagaggactctggccgttgggatgacggcagttgt
ggtgatatacgtcctattatgtgtgaaatagacaacaaatag
DBGET
integrated database retrieval system
