Labeo rohita (rohu): 127153052
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Entry
127153052 CDS
T09007
Symbol
gtf3c5
Name
(RefSeq) general transcription factor 3C polypeptide 5
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lroh03021
]
127153052 (gtf3c5)
Transcription machinery [BR:
lroh03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
127153052 (gtf3c5)
TFIIIC, fungi type
127153052 (gtf3c5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tau95
Tau95_N
TFIIF_beta
Astro_capsid_p
Motif
Other DBs
NCBI-GeneID:
127153052
NCBI-ProteinID:
XP_050949967
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All DBs
Position
21:complement(23863707..23873931)
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AA seq
523 aa
AA seq
DB search
MDPVLTSNPASAGTDVRNKGESQDAVVVSGNTATLALSDTSLVCVEYPAVVNNVDTMLES
IGGEEGVSKTYGDSSKRLELRFRPKDPFSHPAYGNRYSSTNLLLRVRRRTRKGNSAETQI
SMEIVGLIGTTYKFQGMADFQYLASHNDPDGNQMSLYDKIILRKPEKKDFYDSPVPLFLP
PPIFSRLDTPVDYYYRPDVLHSRETAMQSVLLKDHIIAPNRARRPNNAIFVNFDDKTIPS
EPLEAAVMSWKKVCVHPNDVKAEQQLRQLFEKRPIWSRNAVKANINIHPEKMKHLLPYVA
YYMLTGPWRSLWVRFGYDPRKTAEAKIYQVLDFRIRYGMKHGFGVNDMPVKPKRSAYHYS
HPTTINRAVPQPASVSDITQESPSSSGPKPATAKYLLKDSVYIFREGMLPPYRQMFYQLC
DLDVEKIKNIIHKNDGKEEVCDERDGWCVPHTADELRNIISGMIQQHVRVNRPASSTQKP
VRARPKTVDSGEEEDEDDDIDDEDYKPSDGSDNEMETEIADYM
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggatccggtgcttacaagcaaccctgcttcggcaggcacagatgtgagaaacaaagga
gaaagccaggatgcagttgttgtgtcaggcaatacagcaacactggccctgtctgacact
agtctggtgtgtgttgaatacccagcagtcgtcaacaatgtggacacaatgctggaaagc
attggaggcgaagagggagtgtctaagacatatggagattcatctaaaagacttgaactc
cgttttcggccaaaggatccgttctcccatcccgcttatgggaaccgctattcctccacc
aacctgctgctcagagtgcgccgcagaacccgcaaaggaaacagtgcagaaacccaaatc
agcatggagatagtgggacttattgggaccacatataaatttcaaggaatggctgacttc
cagtacctagcgtctcacaacgatccagatggaaaccagatgtctttgtacgacaagata
attttacgcaaacccgagaagaaagacttctacgacagtcctgtgcctcttttccttcct
cctcctattttctctcgcctcgacactcctgtggactattactatcgtccagatgtattg
cacagcagggagaccgcaatgcagtctgttctcctaaaagatcatatcattgccccgaat
cgagctcgccggccaaacaatgccatttttgtcaactttgatgacaaaactataccgtca
gaacctttagaagctgcagttatgagctggaagaaggtctgtgtccatcctaatgatgta
aaggcagagcagcaactcagacagcttttcgagaaaaggcccatatggtctcgcaatgca
gtcaaggccaacattaacattcaccctgagaaaatgaagcacctcctcccttatgtggca
tactacatgttaacagggccatggaggagtttgtgggtcaggtttggatacgatcctcga
aagacagctgaagcaaaaatctaccaggttctagacttcaggatccgctatggaatgaaa
catggatttggcgtcaacgacatgccagtgaaacccaagagaagtgcttatcattacagc
cacccgaccactatcaacagggcagttcctcaacctgctagtgtgtccgacatcacccag
gagagtccttcatcttcaggacccaaacctgccactgccaagtacttactaaaggattcc
gtctacatcttccgggagggaatgcttcctccataccgccagatgttctaccagttgtgt
gatctagatgtagaaaaaataaagaatatcattcacaagaatgatgggaaagaggaagtg
tgtgatgagagagatggctggtgtgtgcctcatacggccgacgagctcaggaatatcatc
tctggaatgatccaacaacacgtccgagtcaaccgaccagcttcatccacccaaaagcct
gtaagagctagacccaaaactgttgacagcggagaggaggaagacgaagatgacgatatt
gatgatgaagattacaagccctctgatgggagcgacaacgaaatggaaactgagattgca
gattacatgtaa
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