Labeo rohita (rohu): 127153058
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Entry
127153058 CDS
T09007
Name
(RefSeq) dynein axonemal intermediate chain 1
KO
K10409
dynein axonemal intermediate chain 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
127153058
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lroh03037
]
127153058
04812 Cytoskeleton proteins [BR:
lroh04812
]
127153058
Cilium and associated proteins [BR:
lroh03037
]
Motile cilia and associated proteins
Dynein arm
127153058
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
127153058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_WDHD1_1st
EIF3I
Beta-prop_RSE1_2nd
WDR55
Beta-prop_NUP159_NUP214
WD40_RFWD3
MIOS_WD40
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_ELP1_2nd
Beta-prop_WDR90_POC16_2nd
DUF4191
Motif
Other DBs
NCBI-GeneID:
127153058
NCBI-ProteinID:
XP_050949986
LinkDB
All DBs
Position
21:19461399..19482584
Genome browser
AA seq
660 aa
AA seq
DB search
MSVAHKVGTVKSKQAPNVNTQQKAAMAKGVKAIGKKKDEEEGLDTAEGEEWMQGKTLVKP
PDQLELTEAELNEEITRVLTANNPNAPQNVVRYSFKEGCYKPIVFVDQMAIHFELEGNLV
HKESDEGRRLTAKQAEVDDGGGDERPDNVVIKASKREQKLTNQFNFNERASQTLNNPPRD
ISCQTEPPPRANFSATANQWEIYDFYTEELQRREKSKEKHEGQFVNKEEDKNKKKMIQAE
IQNDDISQLTKAVKIIERMVNQNIFDDVAQDFMYFDDASDEFRGEKGTLLPLWTFQYDKA
KSLSVTALCWNHKYNDLFAVGLGSHEFTQQGGGMVLFYTLKNPNYPEFIFNTASGVMCVD
IHEHLSYLVAVGLYDGCVAVYNLKKKTDQPIYNSRASSGKHTSAVMQVKWQKDDLDSNHN
FISVSAGGRVVSWTLVKHELVFTDIIKLPVIDTIPDDLKDVVPTVGTSLDFHKQKDYSFL
VGTEHGKIHKGSKYYSSKFLETYDAHFMTVTRVRWNPFHPDVFISCGWDWMVKIWDQTMK
SPVFTFELKTSVTDVAWAPYSSTVFAAVTTDGKVHVFDLNINKYEALCQQKVVSKKTRLL
HIEFNPVHPIIIVGDDRGHVTSLKLSPNLRKKPKEKKGQEMPKGPEVEIAKMEQLLSSLR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttgctcacaaagttgggactgtgaaatctaaacaggcacctaatgttaacacc
cagcaaaaggcagctatggcaaagggtgtcaaagccattggaaagaagaaggatgaagag
gaagggctagacacagctgaaggagaggaatggatgcaggggaagactctcgtgaagcct
ccagaccagctggagttaactgaggcagagctgaatgaagagattaccagagtactgaca
gcaaacaatccaaatgctccacagaacgttgtcagatacagtttcaaagagggctgctat
aaaccaattgtctttgtggatcaaatggctattcactttgaactagaaggaaatcttgtg
cacaaggaatctgacgaaggtcggagattgacggctaaacaggctgaagttgatgatggt
ggaggagatgagagaccagataatgtggtcatcaaagctagcaagagagagcagaaactc
accaaccagttcaacttcaacgagagagcctctcagacactaaacaaccctccaagagac
ataagttgtcaaactgagcctcctcctcgtgcaaacttctcagctacagccaatcagtgg
gaaatctatgacttttacacagaggaacttcaaaggcgtgagaaaagtaaagagaagcat
gaaggccagtttgtaaataaggaggaggacaagaacaagaagaagatgattcaagctgaa
attcagaatgatgacatatctcagctaactaaggcggtcaagatcattgagcgtatggtg
aatcaaaatatatttgatgacgttgcacaagatttcatgtattttgatgatgcatctgat
gaatttagaggagagaagggcactcttctcccactgtggacgtttcagtatgataaagcc
aaaagtctgtctgtgactgccctctgctggaatcacaaatacaatgatttgttcgctgtt
ggtctcggttcacatgaatttactcaacaggggggtggcatggttctcttttacaccctg
aagaaccccaattacccagaattcatctttaacacggcctcaggcgtaatgtgtgtagac
attcatgaacatctgtcctacctggtggctgtgggattgtatgacggctgtgttgcagtg
tacaacctgaagaaaaagaccgatcagcccatttataacagcagagccagctccggcaaa
cacacaagtgctgtgatgcaggtgaagtggcagaaagatgatttggacagtaaccacaac
ttcatctctgtgtctgctggtggacgagtggtgtcttggactctggtaaagcatgaacta
gtcttcacagacattatcaagctcccagtcattgacacaattccggatgaccttaaggat
gttgttcctacagttggaacatctttggactttcacaaacaaaaggactacagttttctt
gttggcacggagcatggaaagattcacaagggctccaaatactattctagcaagttcctg
gaaacatatgatgcccacttcatgaccgtcactcgtgtgaggtggaatcctttccatccc
gacgtttttatatcctgcggctgggactggatggttaaaatttgggatcaaactatgaag
tctcctgtgttcacctttgaactgaaaacttcagtgacagatgtggcctgggctccatat
tcctccactgtctttgctgctgtcaccactgatggaaaggttcatgtgttcgacctcaac
atcaacaaatatgaggctctttgccagcaaaaagtggtgtccaaaaagaccaggctcttg
cacatcgaattcaaccctgtccatcctatcatcatcgtgggcgatgaccgcggccatgtc
accagcctcaagctctctcccaacctccgcaagaaacctaaggagaagaagggtcaggaa
atgccgaaggggccggaggtggaaatagcaaagatggagcaactgttgagctcgctgaga
tag
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