Labeo rohita (rohu): 127153068
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Entry
127153068 CDS
T09007
Symbol
cdk9
Name
(RefSeq) LOW QUALITY PROTEIN: cyclin-dependent kinase 9
KO
K02211
cyclin-dependent kinase 9 [EC:
2.7.11.22
2.7.11.23
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127153068 (cdk9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lroh01001
]
127153068 (cdk9)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lroh03021
]
127153068 (cdk9)
Enzymes [BR:
lroh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
127153068 (cdk9)
2.7.11.23 [RNA-polymerase]-subunit kinase
127153068 (cdk9)
Protein kinases [BR:
lroh01001
]
Serine/threonine kinases: CMGC group
CDK family
127153068 (cdk9)
Transcription machinery [BR:
lroh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
127153068 (cdk9)
Brd4/P-TEFb complex
127153068 (cdk9)
7SK RNP complex
127153068 (cdk9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Kinase-like
RIO1
Motif
Other DBs
NCBI-GeneID:
127153068
NCBI-ProteinID:
XP_050949997
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All DBs
Position
21:complement(26801671..26808721)
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AA seq
393 aa
AA seq
DB search
MQRDKTGSSGGGDKPDRETAIMSKYYDGVEFPFCDEFSKYEKLAKIGQGTFGEVFKAKHR
QTGKKVALXKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATQFNRYKGSI
YLVFDFCEHDLAGLLSNANVKFTLAEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLITR
DGVLKLADFGLARAFSLAKNSQGNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGGGCIM
AEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKKYELYQKMELPKGQKRKVKDR
LKAYVKDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDLKNMLSTHNTSMFEY
LAPPRRRGHMPQQPANQNRNPATTSQPEFDRVF
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgacaaaaccggaagctccggcggtggggataagccggacagagagaccgcc
atcatgtctaaatactatgatggggtcgagtttcccttctgtgatgagttctccaaatat
gagaagctggcgaagatcggccaaggcaccttcggggaggtgttcaaggctaaacacaga
cagacggggaagaaggtggctttannaaaagtacttatggagaatgagaaagaagggttt
cccatcacagctctgagggaaatcaagatcttacagctgctcaaacatgagaatgtggtg
aacctcattgagatctgcaggacaaaagccacacagtttaatcgttataaaggcagcatc
tacctggtgtttgatttctgtgagcacgatctcgctggactgctgagcaacgctaatgtt
aaattcactctggctgagattaagaaggtgatgcagatgctgctgaatggactttactac
atacacagaaacaagatcctccacagagacatgaaagcagccaatgttttgatcaccaga
gatggtgttctgaagctggctgattttggattggccagagcatttagtttggctaagaac
agtcagggaaatcgctacacaaatcgggtcgtcacactgtggtaccgaccgcctgaactg
ctgctgggtgagagagactacgggcctcccatagatctgtggggtggagggtgtatcatg
gcagagatgtggaccagaagccccatcatgcagggcaacacagaacaacatcaacttacc
ctcattagtcagctgtgtggctctattactcctgaggtttggcctggagtggataagaag
tatgagctgtatcagaagatggagcttcctaaaggtcagaagcgtaaggtgaaggacaga
ctgaaggcttatgtgaaagacccgtacgctctggaccttattgacaaactgttggttctg
gatccggctcagagaatagacagtgacgacgctctcaaccacgacttcttctggtccgac
cccatgccctctgacctcaaaaacatgctctcaacacacaacacctccatgtttgagtac
ctggcgccgccacgcaggagaggccacatgccccagcagccagctaatcagaacagaaac
ccagccaccaccagccaaccagagtttgacagggtgttttga
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