Labeo rohita (rohu): 127153070
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Entry
127153070 CDS
T09007
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127153070 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127153070 (sart1)
04121 Ubiquitin system [BR:
lroh04121
]
127153070 (sart1)
Spliceosome [BR:
lroh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
127153070 (sart1)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127153070 (sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
HA
Motif
Other DBs
NCBI-GeneID:
127153070
NCBI-ProteinID:
XP_050950003
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All DBs
Position
21:complement(12850701..12862267)
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AA seq
776 aa
AA seq
DB search
MGSSKKHKEKEKDRDPEDRHREHKKHRHKDRDKEKDREREKRKRSRSRERSSRGAEKDRG
GKADRSNAEPRVKKEKPDPAFEDNSEPGPKSASGDASLSIEETNKLRAKLGLKPLDLNES
KKEAGTKEEPLLAEAINPVQIKQQAEMREKLAALKEKRLLNQKLGKVKALGDEEPWLDDT
AAWVERSRKLAKEKEMAEKRAKLLEEMDEEFGVSNLVEQEFAQDKRDAYGSRDLKGLKVQ
HKMESFKEGETVVLTLEDKGVLEEEEDVLVNVGLIDKEKAEKNVELKKKKPDYKPYEEEE
SVDDMVILKPKSVLSKYDEEIEGEKKKSFRLNTGGFVGGERERELQAIRENLRNQAQSLN
MPALTLAHEYYTPQEMVGFKKTKRKVKKIRKKETILKAHDLLVDDTRSSDFGSRSRGRGK
KQDEEQGVEPRDVAIETISKASDVLQKSDDIRMADMDISDDEDYTPPEPVVLEEDEAEEE
LQKQLEKQRKLRQKQMLKDSGEKVAEHVNRLVKAEDDDNDPDKKNNIVFNATSEFCRTLG
DIPTYGLSGNREDQEDIMDFEKDNEKEGGGQSDSDMDDNVGWSTVNLDEEKNQADFSTAS
TTILDEEPIVNSGLAAALLLCKNKGLLDTQMQKVARVKAPKAALPEDNYCIEDKMNIDDK
YSRREEYRGFTQDFKEKDNYKPDVKIEYVDESGRKLCPKEAFRQLSHRFHGKGSGKMKTE
RRMKKLEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANTITK
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgggttcatcaaagaaacacaaagagaaggagaaggaccgggatccagaggaccggcac
cgtgagcacaagaaacaccgtcacaaggaccgagacaaggagaaggaccgcgagcgagag
aagcgaaagagatcccgctccagggagaggagcagccggggagcagagaaggaccggggc
ggtaaagcagacaggagcaatgcggagccaagagtcaagaaagagaagccagatcctgct
ttcgaggacaacagcgagccaggtcccaaatctgccagtggtgatgcttcactcagcatt
gaagagaccaataaactgagggccaaactaggcttgaaaccccttgatctcaatgaaagc
aagaaagaggctggaactaaggaggagcccctcctggctgaggccatcaatcctgtccag
atcaaacaacaggctgagatgagagagaaactggctgctcttaaagagaagcgtctactc
aatcaaaaactggggaaggtgaaggcattaggagacgaggagccatggctggacgacaca
gcagcgtgggtggagaggagtcgcaaactagccaaggagaaggagatggcagagaagagg
gccaagctcctagaggagatggatgaagagtttggtgtgagcaatctggtcgagcaggag
tttgcacaggataagagggacgcatatggctcacgtgatctcaaagggctgaaggttcaa
cacaagatggagtctttcaaagagggggaaacggtcgtcttaactctggaagacaaaggc
gttctggaggaggaagaggacgtgttggtgaatgtgggtctgattgataaagaaaaagca
gagaaaaatgtggagctaaagaagaagaagccggattataaaccatacgaagaagaggag
agtgtggatgacatggtcattttaaagccaaagtctgtgctgtcaaagtatgatgaggag
atcgagggggagaagaaaaagagtttcaggctcaatactggaggttttgttgggggtgag
agagaacgggagctacaggccatcagagagaacctgcgcaatcaggcccagtctttgaac
atgcctgctctcaccctcgcccatgaatactacacaccacaggagatggtgggctttaag
aagaccaaacgcaaagtgaagaaaatcagaaagaaagagactatactcaaagctcatgac
ctcttggtggacgacactcgtagctcagatttcggctccaggtctagaggtcgaggtaag
aagcaagatgaggagcagggggtggagcctagagatgttgctattgaaaccatcagcaag
gccagcgatgtcctccagaagtctgatgatattagaatggctgacatggacattagtgat
gacgaggactacacccctccagagcctgttgtgttagaagaggatgaagctgaggaggag
cttcagaaacagcttgagaaacagaggaaactcagacaaaaacagatgctcaaagactca
ggagaaaaggtggctgagcatgtgaatcgattagtgaaggctgaagatgatgataacgac
ccagacaaaaagaacaacatcgtctttaatgccacctctgaattttgccgcacacttgga
gacatccccacctacgggctgtcaggaaaccgagaggaccaagaggacattatggacttc
gaaaaggacaatgagaaagaaggaggcggacaatcggactctgatatggatgacaacgtg
ggctggagcaccgtcaacctggatgaggagaaaaaccaggcagatttctcaacagcctcc
acgactattctggatgaagagccaattgtgaactctggtcttgctgccgctctacttctg
tgcaagaataaaggactgctggacacacaaatgcagaaggtggctcgtgtcaaagcccca
aaagcagctctgccagaagataactactgcattgaagacaagatgaatattgatgacaag
tacagcaggagggaggaatacagaggcttcactcaggattttaaagaaaaggataactac
aagccagacgtcaagatcgaatacgttgatgaatctggtcgcaagctctgccctaaagag
gctttcagacagctgtcccatcgtttccatgggaagggctctggcaagatgaagactgag
aggaggatgaaaaagctcgaggaggaagcgctgctgaagaagatgagcagcagtgacact
cctctgggcaccgttgctcttctgcaggaaaagcagaagtcccagaaaactccttacatt
gtgctgagcggaagcgggaagagcatgaacgcgaataccattacaaaatag
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