Labeo rohita (rohu): 127153243
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Entry
127153243 CDS
T09007
Symbol
hps3
Name
(RefSeq) LOW QUALITY PROTEIN: Hermansky-Pudlak syndrome 3 protein
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127153243 (hps3)
Membrane trafficking [BR:
lroh04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
127153243 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
127153243
NCBI-ProteinID:
XP_050950176
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All DBs
Position
22:complement(9756093..9771016)
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AA seq
1003 aa
AA seq
DB search
MVHVYNCHPFASQHIVAAEQEPGLVCCSGGALFVVSAGGCKIEAYNLQQEGCPLICRFSS
MGSVLSIRHSAVGDYLVTIEEKNKATYLRAYTNWRYQAAEKTRVGVRLLGHLLRGSSFRG
TPKEQMEIIEIPLFEPPLCMACCSITGDLLVGCAKSLVVFSLKRQTLSEQLSVLDFERVL
ILHIQGWSPSQVAFCAGYVALQTDLEILVVKLTPRQKSSQAADEHALLPEDIMTETSLDE
DAEMTKDGFSPLHEQEDFFLFPKHQEMLGNDAQECGISLVLEWTGMEADSRGDMSVVYVL
FRRFAPDFFQGCSVEETHLHSLQLRPMFSGKQEEASISKRGEPTCMFVFFSLPNTGYMYS
LKNTVELMSTYQYPEKAHQAVLSDQFLYVITRNALQCFTVRCSAVAARVDDPYIDTTMKA
CPPITMEVCALRIQLFIGLKIICQDGNHIVLLTAADVDSKEDTERPARKNTSRKTSVCKA
TEPADSGHGWNLYVISSVSTLQLYREIVEYSKRYEQSLSHSCIHLLSEGHLLLRTALLSL
QDCDSAERAQLQEAFQESCAHLGDCFSRFDKKDCHLALPYYKMSGLTVTDVIKRNMSMSG
ISNGYGKGFIFFLKHSIYEETMEELSKDMADKVLDIFSVAEPAQLPHVVSSPSMLNADPD
SAMTHLKQLEDSGXPSITLSLCTASLALRKGDLNSYRQQMDRHAEMLQVYGFIEEPKLLL
HGRGKAVLPTILAQHLRDTQEGLLVAAVVALHENSKIRLEEADVFFQELCKDGVEVDSSP
QLLVDFWEALLVASSHESIIQELLFRLTSVYIDRITRRDHSGIRALKTAEDLINSCSHYG
MLYPWVSILTPVQFNINHDHQEDLHKLQSLLCGPTLEVSSILPLLEQLSESDNTGLSVHV
LCATKLGQHERSIVRLLDRCPQAIISYANNELQNDKLSLWWQKLFPEVCDRIRKTGNDTV
LLSALKETLVVASKELNPLEFLDLLPDDGTAHFFLPHLLECSQ
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggttcacgtctataactgccacccgttcgcgtctcagcacatcgtcgcggcggagcag
gagcccgggctggtgtgctgcagcggcggggcgctgttcgtcgtgagcgccggaggctgc
aagatcgaggcgtataacctgcagcaggagggatgtccgctcatatgccgcttcagcagc
atgggctccgtgctcagcatccgacacagcgccgtgggggactacctagtgaccattgag
gagaagaacaaggccacatatctcagggcctacactaactggaggtaccaggctgcagag
aagacgcgtgttggggtgcgtctgttgggtcacctcctgcggggctcgtccttccgtgga
actcctaaagagcagatggagatcattgaaatccctctatttgagccgccgctgtgtatg
gcatgctgcagtattactggtgatcttctagttggctgtgccaagagtctggtggtcttc
agtctgaagcgacagacgctgagcgagcagctctctgtgctggactttgagagggtcctt
attcttcatatccagggctggagtccgtctcaggtggccttctgtgctggatacgtagcc
cttcagacggatctggagatcctggtggtaaaactcaccccgcggcagaagagcagccag
gctgcagatgaacacgcactgctacctgaagatatcatgactgaaaccagcttagatgaa
gatgcagagatgacaaaagatggattcagcccgcttcacgagcaagaggacttctttctg
ttcccaaagcatcaggagatgttgggtaatgacgcccaggagtgcggcatctctttagtc
ctggagtggactggtatggaggcagatagccgaggggacatgagtgtagtttacgtctta
ttcaggaggtttgcgcctgatttctttcaaggttgcagcgttgaggagacacacttgcat
tccctgcagctccgccctatgtttagtggtaaacaggaagaagcctccatctccaaacgt
ggggaacctacgtgtatgtttgttttcttctccttgccgaacaccggctacatgtacagc
ttgaagaacacagtggagctcatgtccacgtatcagtacccagaaaaggcccatcaggct
gtgctgagtgaccagttcctctacgtcatcaccaggaatgctctccagtgtttcactgtc
agatgcagtgcggtagcggctcgggtcgatgacccatacatcgacaccaccatgaaggcc
tgtcctcccatcacaatggaggtgtgcgctttgaggatccagctcttcattggactgaag
attatctgtcaggacggaaatcatatcgttctcctcacggcagcagatgtggacagcaaa
gaggacactgagagaccagcccgcaaaaacacatccaggaagacgtctgtctgcaaagcc
acagagccggctgacagcggtcacggctggaacctctacgtgatcagctctgtgtccaca
ctgcagctctacagagaaatagtggaatacagtaagcgatacgagcagtcgttgtctcat
agttgcattcacctgctgagtgagggtcacctgctcctgcggacggcactgctcagcctg
caggactgcgattctgccgagagagcgcagctgcaggaggcctttcaggagagctgtgct
catttaggagactgcttcagcaggtttgataagaaggactgtcatttggctcttccatac
tataagatgtcaggcctcactgtgacggatgttatcaagaggaatatgtccatgagcggc
atctcaaacggttacggcaaagggtttatcttcttcctgaagcattcgatctatgaggaa
accatggaggagcttagcaaggacatggctgataaagtcctggacatctttagtgtggct
gagcctgctcagcttcctcatgtcgtgagcagtccgtccatgctgaacgctgatcctgac
agtgccatgacccacctgaaacagctagaagactccgggnccccgtccatcactctgtcc
ctgtgtacagcctccctggccctgcggaagggtgacctgaacagctacaggcagcagatg
gaccgccacgcagagatgctgcaagtgtacggcttcatagaagagcccaaactgctgctg
cacggcagagggaaggccgtgctgcccaccatactggctcagcacttgcgtgacacacag
gagggtctgctggtggcggcggtcgtagcgctgcatgagaacagcaagatcagactggag
gaggccgatgtcttcttccaggagctgtgtaaggatggtgtggaggttgacagcagtccc
cagttactggtggatttctgggaggctctgttagtagcgtcctctcatgaatccatcata
caagagctgctgtttcgtctcacatctgtctacatcgaccgtatcacacgcagagatcat
tccggcatcagagcccttaaaacggcagaggatctgataaactcctgctctcattatggg
atgttgtatccttgggtgagcatcctgacacctgtccagttcaacatcaaccatgaccac
caggaggacctgcacaaacttcagtcactgctgtgcggcccaacgttggaggtctcgtcc
atcctgcctctgctggagcagctgtccgaatctgacaacaccggactcagcgtgcacgtg
ctctgcgccaccaaactaggccaacacgagagatccatcgtcagacttctagaccgatgt
ccgcaagccatcatctcctacgccaacaatgagctacagaatgacaaactgtctctgtgg
tggcagaagcttttccctgaggtctgtgacaggataaggaaaacaggaaatgacactgtt
cttctctcagcactcaaagaaactttggttgtggcgtccaaggagttgaacccactggag
ttcctggacttgttgccggatgatggaacggctcatttcttcctgccacatctacttgaa
tgcagccaatga
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