Labeo rohita (rohu): 127153324
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Entry
127153324 CDS
T09007
Symbol
nr5a2
Name
(RefSeq) nuclear receptor subfamily 5 group A member 2 isoform X1
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127153324 (nr5a2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lroh03310
]
127153324 (nr5a2)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
127153324 (nr5a2)
Nuclear receptors [BR:
lroh03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
127153324 (nr5a2)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
ZnuA
FliG_M
Motif
Other DBs
NCBI-GeneID:
127153324
NCBI-ProteinID:
XP_050950308
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Position
22:27433304..27509011
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AA seq
549 aa
AA seq
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MSTSLESQLGQRDSSKDLGGAARTHQRLSRAVMLPKVESESLGLARSHGEQGHMPGNMQA
PQFKMMDYSYDEDLDEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSC
QIDKTQRKRCPYCRFQKCLTVGMKLEAVRADRMRGGRNKFGPMYKRDRALKQQKKALIRA
NGLKLEAMTQAMQTVPADLTITSAIQNIHSASKGLPLSHHHHHHHHHHHHSSSSAGLPPA
DFDRSPFVTSPVSMAMPPHAGGLQGYQAYGHFQSRTIKSEYPDPYTSSPESLMGYPYVEA
YAGGSPPTFPHLVVELLKCEPDEPQVQAKILAYLQQEQASRGKHEKLNTFGLMCKMADQT
LFSIVEWARSSIFFRELKVDDQMKLLQNCWSELLILDHVFRQVMHAKEGSILLVTGQQVD
YALIASQAGATLNNLLSHAQELVSKLRSLQLDQREFVCLKFLVLFSLDVKNLENFHLVES
VQEQVNAALLDYVMCNYPQQTDKFGQLLLRLPEIRAISLQAEEYLYYKHLNGDVPCNNLL
IEMLHAKRA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtccactagtttggagagtcagctgggacaacgtgactccagtaaagacttgggcgga
gcggcgcgtactcatcagcggctcagcagagctgtcatgctgcctaaagtcgagtcggaa
tctctgggactcgctcgatcgcatggggaacaggggcatatgcctggaaacatgcaagcc
cctcagtttaaaatgatggactactcctacgacgaagatttggacgaaatgtgtccggtg
tgcggagacaaggtgtccggatatcactacgggttactgacctgtgagagctgtaagggc
ttcttcaagcgcacggtgcagaacaacaagcgctacacatgtatagagaaccagagctgt
caaatagacaagacccagcggaaacgctgcccctactgtcgcttccaaaagtgcctcact
gtcggcatgaaactggaggctgtgagggctgatcgaatgagaggaggtcgcaacaagttt
ggcccaatgtacaagcgagaccgggcgcttaagcaacaaaagaaagccttgatccgggcc
aacggactcaagctggaggccatgacgcaagccatgcaaaccgtcccagcagacctcacc
attacctctgccatccagaatattcattcggcctccaaggggcttccactgagccaccac
catcatcaccaccaccatcaccaccaccacagctcctccagcgcaggcctgccacctgca
gactttgaccgcagtcccttcgtcacctcgccggtcagcatggccatgccgccgcacgcc
ggaggactccagggctaccaggcgtacggccactttcagagccgcaccatcaagtcagag
tatcccgacccttacacaagctcgccggagtccctcatgggctacccgtacgtagaagcc
tacgcgggcggatcgccgcccaccttccctcacctggtggtggagctgctcaagtgcgag
ccggacgagccccaggtgcaagcgaagattctagcctacctccagcaggagcaggccagc
cgaggcaagcacgagaaactcaacacttttggcctcatgtgcaagatggccgaccagaca
ctgttctccatcgtagaatgggccaggagcagcatcttcttccgggaactgaaggttgac
gaccaaatgaagcttctccaaaactgctggagtgaactcctcatcctggaccacgttttc
cggcaggtgatgcacgccaaagagggctccatcctcctggtcacggggcaacaggtggat
tacgccctaattgcctcccaagccggtgccacactcaacaacctcctgagtcacgcgcag
gagctggtgagcaaactacgatccctccagctggaccagagggagtttgtctgcctcaag
ttcctggtgctgttcagcttggacgtcaagaacctggagaacttccacctggtggagagc
gtccaggaacaggtcaacgcggcgctgctggactacgtcatgtgcaactaccctcagcag
acggacaagttcggccagctgctgctgcggctgccggagatccgggccatcagcctgcag
gctgaggagtatctgtactacaaacacctgaatggtgacgtgccctgtaacaatctacta
atagagatgctgcacgccaaacgtgcctga
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