Labeo rohita (rohu): 127153354
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Entry
127153354 CDS
T09007
Symbol
capn2b
Name
(RefSeq) calpain 2, (m/II) large subunit b
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04141
Protein processing in endoplasmic reticulum
lroh04210
Apoptosis
lroh04217
Necroptosis
lroh04218
Cellular senescence
lroh04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127153354 (capn2b)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127153354 (capn2b)
04217 Necroptosis
127153354 (capn2b)
04218 Cellular senescence
127153354 (capn2b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
127153354 (capn2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127153354 (capn2b)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
127153354 (capn2b)
Peptidases and inhibitors [BR:
lroh01002
]
Cysteine peptidases
Family C2: calpain family
127153354 (capn2b)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
127153354
NCBI-ProteinID:
XP_050950350
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All DBs
Position
22:24405127..24419746
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AA seq
698 aa
AA seq
DB search
MSGVASTLAKKRAQAAGFGTNAKATKYLNQDFEALRSQCLSSGSLFTDSYFPAAPESLGF
KELGPSSYKTRGISWKRPGELCSKPQFIVGGATRTDICQGALGDCWLLAAIASLTLNEDV
LARVVPAGQGFGDNYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELVFVHSAEGNEFWSAL
LEKAYAKVNGCYEALSGGSTSEGFEDFTGGIAESYELRKAPSNMFQIIQKALDAGALLGC
SIDITSAADSEAVTRQKLVKGHAYSLTGATEVNYRGRKEKLVRMRNPWGQVEWTGAWSDN
SSEWNSISASERPNASAEDGEFWMSFSDFVSHYSRIEICTLTPDAITSDSVKHWAVTNHD
GTWRRGSTAGGCRNNAYTFWMNPQYVIKLNEEDDDPDDNEVGCSFVVGLIQKNRRRLRKA
GEDMHTIGFAIYELPSQFHGQRDVHLDKNFFLTHAQKARSETFINLREVCTRFKLPPGEY
LIVPSTFEANKDGDFCLRVFSEKQTETLPCDDPVDAELPDETVSDSEVDSGFRGMFVKLA
GADMEISATELTTILNRIIAKRTDIKTDGFSLETSRVMVNLMDDSGNGKLGLGEFATLWK
KIQRYLGIYKKNDMDNSGTISTPEMRMALKEAGFNLNNTIFQLLVARYAETDMTLDFDNF
VACLMRLEMMFRVFKKLDPHHSGFIELDFQQWLNFTMI
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggagtcgcctctaccctggccaagaagagagcgcaggctgcagggtttggaact
aacgccaaagccaccaaatacctcaaccaggactttgaggcgctcaggagccagtgtctc
agcagtgggtccctgttcacagactcgtatttcccagccgcacccgaatccctgggcttt
aaagaactcggacccagctcgtacaaaaccagaggaatatcatggaaaagacctggggag
ctgtgctcaaaaccacaattcatcgtcggtggagctacacggacggatatctgtcaagga
gctttgggtgactgctggctgctagcggccattgcttctctgaccctaaatgaagacgtt
ctggcacgagtcgtgcctgctggacagggctttggtgacaattatgctggaatcttccat
tttcagttctggcagtttggcgagtgggtggatgttgtcattgatgatcggctgccggtg
aaagatggcgagctggtttttgttcactctgctgagggaaacgagttctggagcgccctg
ctggagaaggcctatgctaaggtaaacggctgttatgaagctctgtcgggaggatcaacc
agtgagggttttgaggatttcactggaggcatcgctgaaagctacgagctgaggaaagcg
ccatccaacatgtttcagatcatccagaaagccctggatgctggagctttgctgggctgc
tcaatcgatatcactagtgccgctgattcagaagccgtcacccgtcagaagctggtgaaa
ggccatgcttactcactcacaggggcaaccgaggtgaactatcgtggtcgcaaggagaag
ctggttcgtatgcgcaacccatggggacaggtggagtggacaggagcctggagtgataat
tcatctgaatggaacagtatttccgcttcagagcgaccgaatgccagtgctgaggatgga
gaattctggatgtcattctcagatttcgtaagtcattattctcgtatagagatctgtact
ctgaccccggacgccattaccagtgattcggttaaacactgggctgtgaccaaccacgac
ggcacatggaggagaggctccaccgctgggggctgcagaaacaatgcttacacattctgg
atgaatcctcagtatgtgattaagctgaacgaagaagatgacgacccagacgataatgag
gtgggctgcagtttcgtggtgggtttgatccagaagaaccggcgccgtctaaggaaagct
ggagaggacatgcacactatcggctttgctatttatgagttaccatcacagtttcacggt
cagcgtgatgtgcatctcgataagaacttcttcctgacgcacgcacagaaagctcgctct
gagactttcattaacctgagggaggtctgcacgcgtttcaagctgccgccgggagagtac
ctcatcgtgccgtccaccttcgaagccaacaaggacggagacttttgtctgcgtgtcttt
tccgaaaaacaaactgaaacactaccatgcgatgatcctgtggatgctgaattacctgat
gagactgtctcagacagtgaagttgattctggattcagaggcatgtttgtaaaactcgct
ggagctgacatggaaatctcagccacggagctcacgactatcttaaacagaatcatcgcg
aaacgaactgacataaagacagacggcttcagtttggagacgtctcgcgtcatggtcaac
ctcatggatgacagtgggaatggaaaactgggtttgggagagtttgcaaccctgtggaag
aaaattcagcgataccttggaatttacaagaagaatgacatggataattcaggaaccata
agcacaccagaaatgcgcatggcgctgaaagaagccggtttcaatcttaataacactata
tttcagctactggtagcacgttacgctgaaacagacatgactctcgactttgataacttt
gtggcctgcctcatgcgtctggagatgatgttccgggtattcaaaaagcttgatccccac
cacagtggcttcattgagctggactttcagcagtggctgaacttcactatgatttag
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