Labeo rohita (rohu): 127153417
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Entry
127153417 CDS
T09007
Name
(RefSeq) E3 SUMO-protein ligase ZBED1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127153417
04121 Ubiquitin system [BR:
lroh04121
]
127153417
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
127153417
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
127153417
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
DUF659
DBD_Tnp_Hermes
OrsD
zf-C2H2_12
Motif
Other DBs
NCBI-GeneID:
127153417
NCBI-ProteinID:
XP_050950428
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All DBs
Position
22:45310068..45312942
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AA seq
614 aa
AA seq
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MAGAASSGKGKEMEMVEPKAGFKSDVWKHFGFSLKRNEKGEKVTDKENTVCRHCQTVVKY
KSGNTTNMRSHLLNHHPEKLREDTRSKIQSGQKTIKEAFTASLPHNSAGAQEITRCIGEY
IAKDLRPFSVVDNEGFKRLVNMLEPKYKISSRPHFSQTVLPALYKETRAKVEQSLKQAEC
ISITTDGWTSQATQSYVTITAHAMTSEWEIKTFVLQTRVLFESHTGHNIGEVLKSAVSEW
ELDMIYNNNHQGIAVFTDNARNMGVAVKEAGLSPHVKCFAHTLNFASQAGLKVNRVSRLL
GRVRRVAAFFHRSSTATAVLTSKQRMLNLPVHKLIMDVITRWNSSLDMIERYLEQEQAIA
AALLSSEVRHNAREIDNLEAADIADAEDIVKLLTPLKKATTVLCDESQPTISLIMPLKHM
IQVSMAPCDVDSNTVSQMKAAILIDLADRYQGEQAEFLYESSALDPRFRALPHLNNSERD
EIFNRLKLKATQMQNQNPSEEEGAAPGSHEHVVGHSKTDLPQKAHAVGGFSPPSKKTALE
DLLGDSFSQGDSRTQHTAQIDAEIDLYRKETSISLMACPLEWWKDNAQRYPLLSTLTKSY
LSVPATSIPNMKAK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgctgctagtagcggcaaaggaaaagagatggaaatggttgaacctaaagcg
ggttttaaatcggatgtgtggaagcatttcggtttctctctgaaaagaaacgagaaagga
gaaaaggtgacagacaaagaaaacacggtatgcaggcactgccagactgtggtgaaatac
aagtcggggaatacgactaacatgaggagccatttgttaaatcatcaccccgaaaagtta
cgtgaagatacgaggagcaaaatccagtcgggccaaaagactataaaagaagcatttaca
gcctcactcccccacaacagtgcgggagcacaagaaatcacaagatgcattggtgaatat
atagccaaagacctacggcccttttcggtggtggataatgaaggttttaagaggttagta
aacatgctggagccaaagtataaaatctcgtcgcggccacactttagtcaaactgtttta
ccagctctttacaaagagacaagggcgaaagttgaacagagcctcaaacaagcagagtgc
atctcaatcaccacagatgggtggacttcacaagctactcagagctatgttaccatcaca
gcacatgctatgacaagtgaatgggagataaaaacttttgtcctacagacacgggtactc
tttgagtcacacactggacacaacataggcgaggtgttaaaatctgctgtttcagagtgg
gagcttgacatgatttacaacaacaatcaccagggcatcgctgtgtttactgacaacgca
agaaacatgggtgtagcggtgaaagaggctggtctgtccccacatgtaaagtgttttgct
cacaccttaaattttgcgtcccaggcaggtttgaaggtaaaccgtgtcagtcgtctgctt
ggcagagtgaggcgtgtagcagcgttttttcaccgcagttcaactgcaacagctgtgctg
acctccaagcagcgaatgttaaacctgccagtacataaactgataatggatgtaataact
aggtggaacagctcacttgacatgattgagcgctacctggagcaagaacaggcaattgct
gcagccctactgagttctgaagtcaggcacaatgcacgtgaaatagacaatctagaagca
gctgacatcgcagatgctgaggacatcgttaaacttctcacacccttgaaaaaagcaacc
actgtgctgtgcgacgaatctcaaccaacaatctctcttatcatgcctctcaaacacatg
attcaagtgagcatggcaccgtgcgatgtagactcaaacaccgtctctcaaatgaaggca
gcaatattgattgatttggcagaccgttaccaaggggagcaagcagagtttctgtatgag
agcagtgcgttggacccccggttccgggccctcccccatctgaataacagtgaaagggat
gaaattttcaacaggcttaagttaaaagcaacacagatgcagaaccagaaccctagtgaa
gaggaaggtgcagcaccaggcagccatgaacatgtagttggacactcaaaaactgacctg
ccacaaaaagcacatgctgtgggaggtttctctcctccatccaaaaagactgctcttgaa
gatctccttggggattcttttagtcaaggggacagcagaacacagcacactgctcagatt
gatgcagaaattgacttgtaccgcaaagagacctctatctcactcatggcttgtcctctc
gagtggtggaaagacaatgcacaacgttacccactgctgtcaaccttgaccaagtcatat
ctctctgtcccagcaacctcaatcccaaatatgaaggccaagtga
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