Labeo rohita (rohu): 127153481
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Entry
127153481 CDS
T09007
Name
(RefSeq) patched domain-containing protein 3
KO
K24682
patched domain-containing protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127153481
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
Other domain-containing proteins
Patched domain-containing proteins
127153481
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
ACR_tran
Phage_p2_ORF12
Motif
Other DBs
NCBI-GeneID:
127153481
NCBI-ProteinID:
XP_050950494
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All DBs
Position
22:65670981..65675122
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AA seq
875 aa
AA seq
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MAKCKTDCIERPLSLIFEKLGRVVGRHPCVFILLVLYVAAALGAGFIFLQEREAHDIEDQ
FTPVNGPAKLERAIVVENFPQSEEFSQLRLVSDGTYASLIITGLNEENILTEAAFNDIIE
LDRQVKNIKTGNTFENLCAKTNGKCMSNAILDIIKYNANEIVSSDITYPIHNGVFLGTTI
GGVELNAVSSVLTSAKAVRLFYFLDEKKTKENSYWLDGFLKLFSNYTDQKTVSVSYFTSV
SRQNEFESSSDSVIPLFSVTYFLAINISVLSCLRLDCVRTKVWVAMFGVVSAGMAVLASF
GLLLFCGMPFAMTVASAPFLILGVGVDDMFIMISCWQKTEVDKEVEFRLAETFKEAGVSI
TITTLTDVLAFYIGLLTPFRSVQSFCMYTSTALLFCYIFNITFFGACLALNGRREKANRH
WLTCMTVPEASGNGKSCCVGGSYDKNTRKEYKMPIDSFFKNYYGPFLTRVWVKMLVCMIY
AGYLAVSIYGCFQIQEGLDLKHLAADGSYVADYYDNEDAFFSAFGPNVMLVIKDEDFQYW
NPAARESLDLCLKNFQNLTMADSDISPFSWLHEYVQFGLNASITVDNETQFKEHLTVFLT
QSEFSQDVNFTNNQIYASRMFIQTVDIRTAIDEKNMLNAFRETTLKCGKLQTPVDLIVYH
PAFIYFDQYAVIISNTIQNIVVATGVMLVISLLLIPNPLCSLWVTFAIASVIVGVAGFMA
LWDVSLDSVSMINLVICIGFSVDFSAHISYAFVSSKKSSANEKAADAVNKLGYPIIQGAV
STIAGVVVLAAAKSYIFRTFFKIMFLVILFGAVHGIVFIPVFLTFLGTCSISPVKNKQNL
PEHSDTNTAKKQQVNTVTSQKMQQVNGSCPDPDCY
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagtgtaaaacggactgcattgaaagacctttgtctctgatcttcgaaaagctc
ggccgtgttgttggtagacatccatgtgtgtttattttattagttttatatgtggctgct
gcccttggagccggtttcatctttcttcaggagagggaggcacatgatattgaagaccag
tttacacctgtcaatggacctgccaagttggagagagcgattgtggtggaaaatttccca
cagtctgaagagttttctcagttacgacttgtatctgatggcacttatgcctctttgatc
atcacaggcttgaatgaagaaaatatattaactgaagcagcttttaatgatattatagaa
ttagacagacaagtgaaaaatataaagactggaaacacttttgaaaacctctgtgccaaa
acgaacggaaagtgcatgtcaaatgcaattttagacattataaagtacaacgctaatgaa
attgtttcttcagatataacatatccaatacataatggcgtgtttttgggaacaaccatc
ggtggtgtagaactaaatgcagttagctcagtgctaaccagtgccaaagcagtcagactt
ttttatttcctagacgagaagaagacaaaggaaaactcttactggcttgatggctttcta
aaactcttctcaaactatacagaccagaagacggtttctgtgtcttactttacatcagta
tcaagacagaatgagtttgagagcagttcagactctgtgattcctctcttctctgttaca
tatttcctggccattaacatttcagttctgtcttgtttgaggttagactgtgtcaggacg
aaggtgtgggtggccatgtttggtgttgtctccgctggtatggccgtgttggccagcttt
ggactgctgctgttctgtgggatgccgtttgccatgactgtagcctcagccccctttctg
attctcggtgttggtgttgatgacatgttcataatgatttcctgctggcagaagactgaa
gttgataaagaagttgagtttcgcttagcagaaacatttaaagaggccggcgtgtccatc
actatcaccacactgacagatgtactggctttctacattggcctcttgacgccatttaga
tcagttcagtcattctgcatgtacaccagcacagctcttctattctgctacatcttcaac
atcaccttctttggtgcgtgtctcgcactcaatggacggagagagaaagccaacagacac
tggctgacctgcatgacagtcccagaagctagtggtaatggtaaatcttgctgtgttggt
gggtcttatgataaaaacacgcgtaaagaatacaaaatgccaattgattcgttctttaaa
aactattacggcccttttctgacaagagtgtgggttaagatgcttgtgtgtatgatctat
gccgggtatttggcagtcagtatctatggatgcttccaaatacaggaaggactagatttg
aaacatctagcagcagatggttcatatgttgctgattactatgacaacgaggatgcattt
ttctctgcttttggtcctaatgtcatgttagtcataaaggatgaagactttcagtactgg
aatccagccgctcgtgaaagtcttgatttgtgtttgaaaaactttcaaaatctgacaatg
gcagattcagacatttcacctttttcttggctgcatgaatatgttcaatttgggctgaat
gctagtataactgtagacaacgaaacacaatttaaagaacatttaactgtatttctcact
cagtctgagtttagtcaagatgttaattttactaacaatcaaatctatgcatcacgcatg
ttcattcagactgtggacatccgcacagcaattgatgagaagaacatgttgaatgcattt
agagaaaccactctcaaatgcggtaagctgcagacacctgttgatctaatagtgtaccac
cctgcattcatctatttcgaccaatatgccgtcattatcagtaatacgatccaaaatata
gtagttgctacaggtgtgatgttagtgatttcactcctgctgatcccaaaccctctctgc
tctctctgggtgacatttgccattgcatctgtcattgtgggagtagccggtttcatggca
ttatgggatgttagtttagattctgtgtctatgattaaccttgttatctgcattgggttt
tctgtagacttctccgctcacatatcctatgcttttgtgtcaagtaaaaaatcctccgca
aatgaaaaagctgcagatgccgtcaataaactgggctatccgatcattcagggtgcagtg
tctactattgcaggtgtggtggtgctcgcggctgctaaaagctacattttcaggaccttt
ttcaaaatcatgtttttagtcattctttttggggcagtccatggcattgtattcatacct
gtgtttctgactttccttggcacttgtagcatcagtcctgtaaaaaataaacaaaacctc
ccagagcacagtgacacaaatacagcaaaaaaacagcaagtaaacacagtcacaagtcag
aaaatgcaacaggtgaatggatcatgtcctgatcctgattgttactga
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