Labeo rohita (rohu): 127153525
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Entry
127153525 CDS
T09007
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127153525 (lingo3a)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
127153525 (lingo3a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
I-set
LRR_4
Ig_3
LRR_1
ig
LRR_LRWD1
Ig_2
LRR_14
LRRNT
LRR_9
Cupin_1
V-set
Ig_C17orf99
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
127153525
NCBI-ProteinID:
XP_050950578
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All DBs
Position
22:28796849..28842926
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AA seq
605 aa
AA seq
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MAGCPHLSLPGLFVLLIAASLTHGQSCPQRCDCIPHQRAVMCQNKRLGSIPGGIPADTRL
LDLSGNSLRWVEYNDLATLLRLEELDLSENLISVLEPNAFSSLLNLRVLRLRANQLKLVP
MGAFSRLTNLTTLDLSGNKLVILLDFTFQDLKNLRNLEVGDNDLVYISNKAFLGLVGLRE
LTIERCNLTSITGQSLSYLRGLVTLRLRYLSIASLEEQNFRKLGGLRGLEIDHWPFLEYI
SPHSFQGLNLSWLSITNTNISTVPTGALRNLIHLASLNLSYNPISVLESWALRDLIRLKE
LHLVGTNLISVQPYGLGGLQQIRLLNFSNNGLVTLEEGSFHSVNTLETLRVDGNPLSCDC
RLLWILQRRKTLNFDGKSPVCATPVELRGKALSTFSDSALFDHFTCQRPKIRNRKLQQLT
AREGQVVSFVCRAEGDPTPVIFWISPQRRRITTKSTGRVIVLPEGTLEIRYAQVTDTGTY
ICIASNAGGNDTYFATLTVSGLPLDGALAANRTYYVGDLNDTNLNDTRVFLKFTLDLKTI
LVSTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQGGARKF
NMKMI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttgtccacacctaagcttaccggggctgtttgtgctcctaatcgctgcatcc
ctaacacatggccaaagctgcccacagcgctgtgactgtatccctcatcagagagccgtg
atgtgccagaacaaacgcctgggctctattcctgggggcatcccggctgacacacggctg
ctggatctgagcggcaacagtttgcgctgggtggagtacaacgacttggcgactctgttg
agacttgaggaactagacttgagtgagaatttaatcagtgttttggagcctaacgccttc
tccagtttgcttaaccttagggtgttgcgtctgcgagccaaccagcttaaactcgtgccc
atgggtgccttttcacgtctcaccaaccttaccactctggatctaagtgggaataaacta
gtcatcctgttggacttcacctttcaggacttgaagaacctccgcaatttggaggttggc
gataatgacctggtgtacatttcaaacaaggcttttctgggattggtggggcttcgggag
ctaaccatcgagaggtgcaatctgacctctataactggacagtctctctcctaccttcgt
ggcttggtgactctccgattacgctacctcagtatcgcttcgctggaagagcagaacttc
cgcaaacttggtggactgcggggtcttgagattgaccactggcccttccttgagtacatc
tctccacacagcttccaaggactcaacctttcctggctctccattaccaacaccaacatt
tccaccgtgcctacaggagcccttcgcaacctaattcacttggctagcctcaatctgtcg
tacaaccctatctcagttctcgagtcctgggccttgcgggatcttatccgcttgaaggaa
ctgcacctagttggtacgaacctgatatcagtgcaaccctacggtcttggaggcctgcag
cagatacgattgctcaacttttcaaacaacgggttagtgactttggaggagggatccttc
cactcggtcaatacgctggagacgttgcgtgtagatggcaaccctttgtcctgtgactgc
cgcctactgtggatcctgcagcgtaggaaaaccctcaactttgacggaaagtcaccagtt
tgtgccacacccgttgaactgcgaggaaaagcactcagtaccttctcggactctgcactc
tttgaccatttcacctgtcagcggcctaaaattcgcaatcggaagctgcaacagctgacg
gcacgtgaaggccaggttgtgtcttttgtatgtcgagcggaaggagacccaactccggtc
atcttttggatttcacctcagcgccggcgtattactaccaagagtactgggcgagtgatt
gtcctgcctgaaggtacactggagatccgctacgcccaagtaacagacaccgggacctac
atctgcatagcaagcaatgctggtggaaacgatacctactttgccaccctgacagtcagt
ggattgccattggatggtgctttggcagccaatcgcacctattatgttggtgaccttaat
gacacaaatttaaacgacacgcgtgtcttcctcaagttcacattggacctcaagaccatc
ctggtgtccacagcaatgggttgtattatgtttctgggtgttgtgcttttctgtttcatt
ctcttgtttgtgtggagccgaggacgaggtcagcacaagaacaatttctcagttgagtat
tcattcagaaaagtagatggtcccgccgccagcgggggtcaaggaggggcacgaaagttc
aacatgaagatgatataa
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