Labeo rohita (rohu): 127153573
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Entry
127153573 CDS
T09007
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127153573 (sox2)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127153573 (sox2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127153573
NCBI-ProteinID:
XP_050950702
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All DBs
Position
22:complement(10645601..10647556)
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AA seq
315 aa
AA seq
DB search
MYNMMETELKPPAPQPNTGGTGNTNSSGNNQKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGGNAMGAGVGVGAGLGAGVNQRMDSYAHMNGWTNGGYGMMQEQLGYPQH
PGLNAHNTAQMQPMHRYDMSALQYNSMTNSQTYMNGSPTYSMSYSQQSTPGMTLGSMGSV
VKSESSSSPPVVTSSSHSRAGQCQTGDLRDMISMYLPGAEVQDQSAQSRLHMSQHYQSAP
VPGTTINGTIPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggaaaccgagctgaagcccccggcgcctcagccgaacacggggggc
acggggaacaccaactcttcgggaaacaaccagaaaaacagcccggaccgggtcaagaga
cccatgaacgcgttcatggtgtggtcgcggggccagaggcggaaaatggcacaggagaac
cccaaaatgcacaattcggaaataagcaagcgactcggggccgagtggaaacttctgtcc
gagagcgagaagcggccgttcatcgatgaagccaagcgccttcgggctctccacatgaag
gaacacccggattacaaatacagaccccggaggaaaaccaagaccctcatgaagaaggac
aagtacaccctgccgggcgggctcctggcgccgggcggcaacgccatgggcgccggtgtg
ggtgtcggggccggcttgggcgctggggtcaaccagaggatggacagttatgcccacatg
aacggctggaccaacggaggctacggcatgatgcaggagcagctgggttacccgcagcac
cctggactgaacgcgcacaacacggcgcagatgcagcccatgcaccgctacgacatgagc
gcgctccagtacaactccatgaccaactcgcagacctacatgaacggatcgcccacctac
agcatgtcctattcgcagcagagcacgccgggaatgacgctgggctccatgggctcggtg
gtcaagtccgagtccagttcgagtccgccggtggtcacatcgtcctctcactcccgggcc
ggacagtgtcaaacgggggacctgcgggacatgatcagtatgtacctgcccggggcggaa
gtccaggatcagagtgcccagagcagactgcacatgtcccaacattaccagagcgcacct
gtgccgggcacgacgattaacggcacgattcccttatcgcatatgtaa
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