Labeo rohita (rohu): 127153647
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Entry
127153647 CDS
T09007
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127153647 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127153647 (rubcn)
Membrane trafficking [BR:
lroh04131
]
Autophagy
Other autophagy associated proteins
Others
127153647 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Motif
Other DBs
NCBI-GeneID:
127153647
NCBI-ProteinID:
XP_050950812
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All DBs
Position
22:complement(12604045..12631609)
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AA seq
950 aa
AA seq
DB search
MEISTEAEDGERRWEHWKLLSNLKTTVEGLLSTNNPNVWSRYGGLQRLHKDMNNILGHGL
KHEQIYYKQKDYWRFVWCVRYLCPHLARHVEQFSQLEPVLSSSVQCFGEGYKAERWLLHS
LQGHILSAQLKPLLQHKTNTQKYYNDGAFLLSEPHVSAMFQCLEAVEQNNPRLLALIDTG
RLSHLKESAFGLLKSQSLCLLPGATGSWRPADSSESRRLTTSQSCLTELPSTPHSKSSSD
VTPSSSAQGAPWVCSRGNQDAGIPQISFTEPASPAPPEIRECVEADLDDGPEYLAIGNLG
KHKRRDSSSSTQSSELMATQGDTHTPLAPPPPRRCSFSEAQKTTGRSSRGHIRSLSDTGV
TQKQKNGGNHRKITIIIEDPVAESVTATPISKSCGPFSPQSSDSSTSSSLYMESTCELAD
SSQYNSVPDGLFRRPSEGQSLISYLSEQDFGSCADLEKENAHFSISESLIAAIELMKCNM
RRPVEEAEEEGDSDTEIQQLKQKIRLRRLQIRRTRMKPPTSSDNQVPSVDSGGSRRSSQD
SFHPSDSGSDRDVEDIELKDGNDGQSLLAVSQIGLSLSLASLFSDADIKRSASSSRSFLS
SDSISPSMLQSNSAESVAMGLLRQFEGMQLPAASELEWLVPEHDAPQKLLPIPDSLPISP
DDGEHADIYKLRIRVRGNLEWAPPRPQIIFNIHPPPKRKVVVAKQNYRCAGCGIRIDPDY
IRRVRYCEYLGRYFCQCCHENSQSVVPAKILRKWDFSKSYVSNFSRDLLAKIAGDPLFNL
NDINSGLYKKVKALDTVRALREQLNHMKNLLKTCRLAKEVLDQFDTLPGHLTEDFHLFSL
SDLTAVRSGSLAPKLRDLLRLGSSHVTDCVLCQAKGFICEFCGNDKDIIFPYELNKCLRC
EDCHACYHKTCFKGGKQCPRCLRLAERRERMARKNMEEQEDREEDEASGT
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatccacggaggcagaagacggagagcgcagatgggaacactggaagcttctg
tctaatctgaagacgactgttgaagggttactgtccacaaacaaccctaatgtgtggtcc
cgctatgggggtcttcagcgcctccacaaggacatgaacaacatcctgggccacggcctg
aaacatgaacagatttactataaacaaaaggactactggcgtttcgtgtggtgtgtgcgc
tatctctgtcctcatctcgcccgtcatgtagaacagttcagtcagctggaacctgtgctg
agcagtagcgttcagtgctttggcgagggttataaagccgagcgttggcttttacacagc
ctccaaggtcacatcttatctgcccagctcaaaccgctactgcaacataagacaaacaca
cagaaatattacaatgacggggctttcctgttgagtgaaccacacgtgtctgccatgttc
cagtgtctggaggccgtagagcagaataaccctcggctgctggctctcatagacaccggc
aggctttcacatttgaaagagtctgcgtttggtttgctgaagagccagagtttgtgttta
ctgcccggggccacaggaagttggaggcctgcggacagttcagagtcccgtcggctcact
acgtcccagagctgccttacagagcttcccagcaccccacactccaagagcagctcagat
gtcactccatccagcagtgctcagggagctccatgggtgtgcagtaggggaaaccaggac
gcaggaataccccagatctccttcactgaacctgcctcacccgctccacctgagatccgg
gaatgtgttgaagcagatctggatgacggcccggagtatctggctatcggtaatctgggg
aagcataaacggcgtgactcgtccagctccactcagagcagtgaactcatggcaactcag
ggtgacactcacactcctttggctccgcccccaccacgccgctgctctttctcagaggct
cagaaaactacagggcggagctcgaggggccacatccggtctctgtctgacacgggcgtc
acacagaaacagaaaaatggagggaatcacaggaaaatcaccattattatcgaagacccc
gtcgcagaatctgtcacggctacacccatttcaaagagctgtggtcctttctcaccccag
agcagtgatagcagcaccagcagttccctttatatggagtctacatgtgaacttgcagac
agcagccagtacaacagcgttccagacggattgttccgcagaccgtccgagggtcagagt
ctgatcagctacctctccgagcaggactttggcagctgtgctgatctggaaaaggaaaat
gcccacttcagcatctctgagtctctgatcgctgccatcgagctgatgaaatgtaacatg
cgcaggccggtggaggaggcagaagaagagggcgatagtgacacggaaatccagcagctc
aaacagaaaatccgtctgcgcagactgcagatacgccgcacgcggatgaagccgccgacc
tcctctgataaccaagtcccatctgtggatagtggcggctctcggaggagctcccaggat
tcctttcacccctctgactctggctcggatagagacgtagaggatattgagctcaaagat
ggcaatgatggtcagtccctgctggcggtgtctcagatcggcctgtccctgtcactcgca
tccctcttctcagatgcagacatcaaacgcagtgcatccagcagcagatccttcctcagc
tcagactccatctctccatccatgctacagtccaactcagcagagtcggtggcgatgggt
ctcctcagacagtttgagggcatgcagctgcccgctgcctcagagcttgagtggctggtt
ccagaacacgacgcccctcaaaaactccttccaataccagattctcttcccatttcacct
gacgatggcgaacacgcggacatttacaaattacgtatccgagtgcgagggaatttggag
tgggctcctcccagaccacagatcatcttcaacatccaccctcctccaaagaggaaagtg
gtggtggccaaacagaactaccgctgcgctggctgcggcattcgcatcgatccagactat
atcaggagggtgaggtactgtgagtatctgggccgctacttttgccagtgctgtcacgag
aactcacagtctgtagtgccagcaaagatcctcaggaagtgggacttcagcaaaagctac
gtcagcaacttttccagggacttgctggccaagatcgcaggagatcctctctttaacctc
aacgacatcaacagcggcctttacaagaaagtcaaagccctggatacagtgcgcgcattg
agggaacagttgaaccacatgaagaatctgttaaaaacgtgccgtttggctaaagaggtg
ctggatcagtttgacactctccctggtcacctgaccgaagactttcacctcttctctctc
agcgatctcacggctgtccgcagcggcagtctggcgccaaagcttcgagatctgctgcgc
ctcggctccagccacgtcacggactgtgtgctctgccaggccaagggcttcatctgtgag
ttctgtggaaatgacaaagacatcatcttcccctacgagctcaacaagtgtctgcgctgt
gaagattgtcatgcttgctatcacaagacctgctttaagggagggaagcagtgtccgcgc
tgtctgagactcgccgagagaagagagcggatggcacgcaagaacatggaggagcaggag
gacagagaagaggacgaggccagcgggacctaa
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