Labeo rohita (rohu): 127153680
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Entry
127153680 CDS
T09007
Symbol
si:ch211-79m20.1
Name
(RefSeq) uncharacterized protein si:ch211-79m20.1
KO
K17386
platelet-derived growth factor subunit B
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04020
Calcium signaling pathway
lroh04510
Focal adhesion
lroh04540
Gap junction
lroh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127153680 (si:ch211-79m20.1)
04020 Calcium signaling pathway
127153680 (si:ch211-79m20.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127153680 (si:ch211-79m20.1)
04540 Gap junction
127153680 (si:ch211-79m20.1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
127153680 (si:ch211-79m20.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lroh04052
]
127153680 (si:ch211-79m20.1)
00536 Glycosaminoglycan binding proteins [BR:
lroh00536
]
127153680 (si:ch211-79m20.1)
Cytokines and neuropeptides [BR:
lroh04052
]
Cytokines
Growth factors (RTK binding)
127153680 (si:ch211-79m20.1)
Glycosaminoglycan binding proteins [BR:
lroh00536
]
Heparan sulfate / Heparin
Growth factors/receptors
127153680 (si:ch211-79m20.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
127153680
NCBI-ProteinID:
XP_050950857
LinkDB
All DBs
Position
22:21371165..21388188
Genome browser
AA seq
479 aa
AA seq
DB search
MMSSRLLLLVLAALAACLRSGRAQEDPLPPSLVDLVMNSPISSVDDLKRLLDVESVEEDD
EKPENEMHSNGTHKRLPRSLNVQVAQQAMCKVRTEVMEVTRSMLDRRNANFLLWPPCVEV
QRCSGCCNTHVIQCVPVTTETRHLQMTKIQFINRQPVYEKVIIPVEDHVTCSCQSRVPAH
SPRLQTTPLPPPKLHPKVTLPKTQSKEELHRNDELKHNQRLHLEDKESQELQWQSKYTVT
HTQGYRQSPFQHTLTHTPVYTSRGDIPTRQTTLGNPHMMSDTTQTEEVEPMKSEHSGDGI
TKKTQQQEDQQTKPYQTTPQQPKNNPSHTSVQSEHSMPHNSQLDGLSRTYSHVEVIGQSS
GLSEVLNHHSDQSEVRKHHHHHHQSEASNQNKHEKEQQQEETQRFLRHQHHRHHQPHQHT
TQAVSQQQTSTQRTVTKSPPTTPSAPQTPPPLQPPRKRRRKHRRRMSKASMRAMIMVMS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctcgcggcttctgctgctggtgctcgcggcgctcgcggcgtgcctgcggtct
ggtcgcgcacaggaggaccctctccctccatctctggtggatttagtgatgaacagtccg
atctcatctgtagatgatctgaagagacttctggacgtagaatccgtagaggaagatgat
gagaagccggagaatgagatgcactctaacggaacacacaagcgtcttcccagaagcctt
aatgttcaggtggcccagcaggccatgtgtaaggtgagaacagaagttatggaagtgacc
cgttcgatgttggacagacgaaacgccaacttcttgttatggcctccgtgtgtggaagtg
cagcgatgctcgggctgctgcaacacacacgttatacagtgtgtgccagtcaccacagaa
actcgacatttacagatgacgaaaatccagtttatcaaccgacaaccagtctacgagaag
gttatcatacccgtggaggaccatgtaacttgtagctgtcaatcacgtgttcctgcacac
tccccacggctccagaccacaccccttcctccacccaaactccaccctaaagtaacatta
ccaaagacgcaatcgaaagaggagctacaccgcaatgatgaactgaaacataatcaaagg
ctccatttggaggacaaagagagtcaagaactacaatggcagtccaaatacacagtcaca
cacacacagggctaccgacaaagcccgttccaacatacgctcacacacacgccggtttat
acaagcagaggagatattcccaccagacaaaccacattaggaaatccacacatgatgagt
gacacaacacaaacagaagaggtcgagcccatgaaatccgaacacagtggtgacggcata
acgaaaaagacgcaacagcaagaggatcaacagacgaaaccataccaaacgacgccacag
caaccaaaaaacaatccttcacacacttccgtccaatcagagcacagcatgccgcacaac
agccaattagacgggcttagtcgcacttacagccacgttgaggtcattggccaatccagc
ggcttatcagaagtgctaaatcatcactctgaccaatcagaagttagaaaacatcaccac
caccaccatcaatcagaagcaagtaaccaaaataagcatgaaaaggaacagcagcaggag
gaaacgcaacgttttcttcgtcaccaacaccaccgacaccatcagcctcaccaacataca
acgcaagcagttagccaacaacagactagcacacaaagaacagtgacgaaatcccctccc
accacgccctcagccccacagactccgccccctcttcagcccccgcgaaagcgccggcga
aaacaccggaggaggatgagcaaggcttccatgagagcaatgataatggtaatgtcctga
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