KEGG   Labeo rohita (rohu): 127153685
Entry
127153685         CDS       T09007                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
lroh  Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lroh03036]
    127153685 (kdm4b)
Enzymes [BR:lroh01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     127153685 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     127153685 (kdm4b)
Chromosome and associated proteins [BR:lroh03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    127153685 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD DUF4537 53-BP1_Tudor Tudor_5
Other DBs
NCBI-GeneID: 127153685
NCBI-ProteinID: XP_050950869
LinkDB
Position
22:complement(59624001..59693872)
AA seq 1173 aa
MDPSLPPDPNPEPEPALGVTPQADAPHGSPVQPTLDLNPQPCQEPLSVPAQEPSPELTLN
PEIKPEPSAPELTPEPPIPEPSPAPALGPPPAANSSYKIMTFRPTMEEFKDFGKYMAYIE
TQGAHRAGLAKVIPPKEWKPRRSYETIEEMVIPAPIMQVVTGQSGLFTQYNIQKKSMTVG
EYRKLANSKKYCTPQHKDFDDLERKYWKNLTFVSPIYGADISGSLYDPDITEWNIGHLNT
LLDMVEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGQPKSWYAIPPEH
GKRLERLAQGFFPGSSQGCDAFLRHKMTLISPSILKKYSIPFDRITQEEGEFMITFPYGY
HAGFNHGFNCAESTNFATLRWIDYGKMATLCSCRKDMVKISMDVFVRCLQPDRYDLWKQG
KDNTVLDHLKPTNLTSPELEHWRKNRVTYREKLLRRAQAKVKQFRRLKLEEVKILAEEGV
DLDMSEYLRKVEEREQQRRQQKDERMAREALLTLEALEREEQEQAEAEAALREGAGEDGK
TESQDPPQQNGEEEEKKKKKKKKKPKHPDELSFQQVFEQFASTETQNQSNGAAPGLQPSP
FTKLKKKVEVKKSRRHPFSKPPMRSPHSIVKQEASSDEELYSGLPVGGGVQPEAKKSEEI
ALWQNRSPNFLAEKQFNAAMATIEPHCAICTLFCPYTQPIKDAFHISDTSGLVSRVGCRT
RPLVPEMCFSAGAENTEPLPSNSHIGDDGTSVLLSCGSCGLQVHASCYGVNPDTKQEGWT
CSRCTAAEWTAACCLCSLRGGALKKTTDDRWVHVICAVAVAEARFVNAVEREPVDVTAVP
DTRKSLKCVYCHKTTKQIFGACIQCSLDNCSTSFHVTCALLAGVVMKPADWPYVVSVTCH
KHKQTNQKVRSHLRRDLNAHGDPQTDALPPLQVKNSSRELSLGQEVIGRSSNGWFYRCTI
TGIGTQNYYEVNFDDGSYCDNVFPENLLSHDCLRNGPPELGELVVVKTVDGRVLNASFVK
EHVHRYYQVEFQDETQILLKRSEIHSLNQELPKRVMSRLATVNQQQPQAQPSDEPLAAKR
PRLPTPPPTLAIEPSALPPEIVTAFLPASITSNTSTAPCLPPPASLPVSAPTLSAPEPSE
SYTHSSSYIAYMESLLNSDFPPEEGEQGVEPMY
NT seq 3522 nt   +upstreamnt  +downstreamnt
atggacccgtcattacctccggacccgaaccccgagcctgaaccggctctaggtgtcact
ccacaagcagacgcccctcacggttcacctgtccaacccaccctggatttgaaccctcag
ccatgccaggaaccgctttcagttccagcccaggaaccatctccagaactgaccctgaac
ccagaaataaagccagaaccatcagcaccagagcttacaccagaaccaccgatcccagaa
ccatccccggctccggccctgggacctcctccagcagccaactcctcctacaagatcatg
accttcagacccaccatggaggagttcaaggactttgggaagtacatggcttacattgag
acccaaggagctcatcgtgctggtcttgcaaaggttattccaccaaaggagtggaagccg
cggcgttcatacgagaccattgaggagatggtcattcccgctccaatcatgcaagtggtg
accggtcaatcgggactcttcacacaatacaacatccagaagaagtccatgacggtcgga
gaatatcgcaaactggctaatagtaaaaagtactgcacacctcaacacaaagactttgac
gacctggagagaaaatactggaaaaacttgacgtttgtgtcgcctatttacggcgcagac
atcagcgggtccctctatgacccggacattacggagtggaacatcggtcatttgaacact
cttctggacatggtggagcaggagtgtgggattgttattgagggcgtcaacacaccctac
ctgtacttcggcatgtggaaaaccaccttcgcctggcacacggaggacatggacctctac
agcatcaactacctgcatttcggccaaccaaagtcctggtatgcgattcctcccgagcac
ggcaagaggttggagaggctggcgcaaggatttttcccaggaagttctcagggctgcgac
gcgtttctccgtcacaagatgaccctcatttctccatccatcctgaagaaatacagcatc
ccctttgacagaatcacgcaggaggagggtgagttcatgatcacgtttccgtacggatat
cacgccggattcaaccacggcttcaattgcgcagagtccacaaacttcgcaaccctgcgc
tggatcgactacggcaaaatggccacactgtgctcgtgtcgtaaagacatggtgaagatc
tccatggacgtctttgtccgctgcttgcagcccgaccgctatgatctgtggaaacagggg
aaagacaacacggtcctggaccacctcaaacccacgaacctcaccagccccgagctggag
cactggaggaaaaacagagtcacatacagagagaaactcctgcgcagagctcaggcgaag
gtgaaacagttccgacgtctgaagctggaggaggtaaagatcttggcggaggagggagtg
gacctggacatgagcgagtacctgcgtaaggtggaggagcgcgagcagcagcgacggcag
cagaaggacgagcgcatggcgcgagaggcgctcctcacactagaggcgctggagagggag
gagcaggagcaggcggaagcggaagcggcccttcgcgaaggagcaggcgaagatggaaaa
acagaatctcaggatcctccacagcaaaacggagaggaggaggagaagaagaagaagaag
aaaaagaagaagccgaagcatcccgacgagctctcctttcagcaggtgtttgagcagttc
gcttccaccgaaactcagaatcagagtaacggagctgctcctggcctgcagccgagtccc
tttacgaagctgaagaagaaagttgaggtgaagaagagccgaagacatccgttcagcaag
cctcccatgcgttcgcctcactccatagtcaaacaggaagcttccagcgatgaggagttg
tactctgggctgcctgtaggtggcggcgtccagccggaggccaagaagtctgaggagatc
gcgctgtggcagaaccgctcgccaaacttccttgccgagaaacaattcaacgccgcgatg
gcgaccatcgagccacactgcgccatctgcacgcttttctgtccgtacacacagcccatt
aaggacgccttccacatctcagacacatccggcttggtgtcccgggtcggctgtcgcacg
cgtccgctggtcccagagatgtgcttcagcgcgggtgccgagaacacagaaccgctgccg
tcgaactcccacattggcgacgacggcaccagcgtcctcctgtcctgcgggagctgcgga
ctacaggtccacgcaagttgttacggcgtcaatcccgacacgaaacaggagggctggacg
tgttcacgatgtactgcggccgaatggacagctgcctgctgtttgtgcagtttaagagga
ggagctttgaagaaaaccacagatgacaggtgggttcacgtgatctgcgccgtcgctgtg
gccgaggctcgtttcgttaacgcggtggagcgagagccggtggacgtgacggccgtaccc
gacaccaggaagagtctgaagtgcgtctactgccacaaaacgactaagcagatctttggt
gcgtgcatccagtgctcgttggacaactgctccacgtccttccacgtcacctgcgccctc
ctcgccggagtggtcatgaagccggccgattggccgtacgtggtgtccgtcacctgccac
aaacacaaacaaaccaatcagaaggtgcgtagccacttaagaagggatcttaatgcacat
ggtgatcctcaaactgacgctttacctccactgcaggtcaaaaatagttcgcgtgagctg
tctttgggtcaggaggtcatcggcaggagcagcaacggctggttctaccgctgtaccatc
accggcatcggcacgcagaactactacgaggtcaactttgacgacggctcctactgtgac
aacgtcttcccagagaacctgctgagtcacgactgcctgaggaacggccctccagaactg
ggcgaactcgtggtggtcaagacagtcgacggacgggttctcaacgcgtctttcgtcaag
gaacacgtccaccgatactaccaggtggagtttcaggacgagacacagatcttactgaaa
cgtagcgagattcattctctgaaccaagagctgcccaagagggtcatgtctcgtctggca
actgtgaaccaacagcaacctcaggcgcaaccgtcagacgaacctctggctgcgaaacgc
ccacgtctgccgaccccgccgcctacgttagccatcgagccttcggcgctacctccagaa
atagtgaccgctttcctgcccgctagtattacttcaaacaccagcactgccccttgcctg
cctcccccagcctcacttcctgtttcagcacccacactttctgctccggaaccgagcgag
agttacactcacagctccagctacatagcctacatggagtctctcctcaactcggacttc
cctccagaggagggcgaacaaggtgtcgagccgatgtattga

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