Labeo rohita (rohu): 127153692
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Entry
127153692 CDS
T09007
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin) isoform X1
KO
K24495
myomesin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127153692 (myom1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127153692 (myom1a)
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
127153692 (myom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
Tissue_fac
C2-set_2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
127153692
NCBI-ProteinID:
XP_050950882
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All DBs
Position
2:20961841..20997697
Genome browser
AA seq
1487 aa
AA seq
DB search
MSQSLKLQKEQQQRDLETHFESSYHQGSLSSVSRQSYAAYVSSSSSSHGHKISKKEKKLS
ALSKKEKRSYLAVDKEDEVIGYVVPVFRSSRLATQDLMETQEEVKEEGVGYVVMRNLFSR
ETDFKMRTVKKSRETSLRESAERMDLSRKMHEKEQFQKKMNPDSLTHPPEFIVKPRGQTV
WEGKSVTLHCTVAGWPKPRVAWYKNNVLIDAKAHPEKYFTESQYNMHSLEIKNCNFSDTA
EYRISALNVKGESSAFAPVIIKRFKEGEEVTERPHGFSPEYGVTFNTTIIDKFDVSFGRE
GETMSLGCTVIVYPTVKRYQPEIVWYRNGVALSPSKWVHMHWSGERATLTLVHLNKEDEG
LYTLRVNTKSGFDTHSAYVFVRDADVEEEGVPVAPLDVRCHDANKDYVVVTWKQPAVEGS
SSIIGYLIDRLEVGTHHWAQCNDTPVKYARFPVTGLIEGRSYTFRVRALNNSGVSRPSRA
SDPVVAMDPSDRARLRAGPSAPWTGMIKFTEEDPTVGVVPGSPTDLAVTEATKSYVVLSW
KPPVQRGHEGVMYYVEKCLVGTDTWQRVNTGMPVKSPRFALFDLAEGKSYSFRVRSCNSA
GVGEASEETGATTVGDRLDLPSVPGPVIPIRNTDTSVVVCWGASKEVKNLVGYYIEVSVN
GSGVWAPCNNKPVKGTRFVCHGLNTGDKCVFRVKAVNAAGYSGSSAESEACIVRASIAVP
SPPVGVTLQERVRDYMVLGWQAPAKTGGADVRGYYLDYRTVKDGVASRWHEINLKAVTST
SYKVTDLKENLFYQFQVRAVNQAGISESSVPTVPLECKEWTVAVPGPPNGLRVLEVRKDS
MVLLWEPPTFNGRSPVTGYYVDYKEENGRWRCVQERSTKNTYMKVTGLQEGVSYKLRVHA
KNLAGVGGPSKSTDAILAVTRPGTNEIVVDVDDDGVISLIFECADLKQDSQFVWSKNYKA
LTDTSRLTIQTSEGKSRAIFNDPSLEDLGTYSCVVTNVDGVSASYTLTEEGLKRLLEISR
DHQFPIIPFKSEMAIELQEKGRVRFWAEVGKFTSNCQVEYVFNDNIIHEGKKYTMNFNKS
TGIIEMFMDLLEVTDEGTFTFNLVDGKATGRTSLVLIGEEFAELQKKSEFERAEWVRRQG
PHFVEYLSFEVTAECDVHLKCKVGNIKPATEIAWFKDGIEIEEEDEDAKKIGKSDDVLIF
DIGKLVIKSEKAEKTCKKKPAAEESPSKPKISKKDAGIYEVDLKDERGKDKTLLNLTDAG
YQAVLNEVFRVIANSSTELKVMSTEHGIILYSFVVHYIEDLRVGWLHKESKISHSDRVQC
GVTGEQLWLKINEPTEKDKGKYAIDIFDGKGSVKRVLDLSGQVWEEAFEEFKRLKAAAIA
ERNRARVVGGLPDVVTIQEGKSLNLTGNVWGDPVPEVSWVKNDKPLLPDDHYTLKFEHGK
FASITIAAVTTVDSGKYALLVKNKYGTEAAEFTVSVYIPEDEAEKKE
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaatccttaaaactacaaaaggaacagcagcaacgggaccttgagacgcacttt
gagagcagctatcaccaaggctccctgtcatctgttagccgccagtcttatgctgcttat
gtgagcagcagcagcagcagccatgggcacaagatttcaaagaaggaaaagaaactgagc
gctctttctaaaaaagaaaagcgctcttacctggcggtggacaaagaagacgaggtcatt
ggatacgttgtgccagtcttcagaagcagtcgtttggctacccaggatctgatggagact
caggaggaggtgaaggaggagggtgtggggtatgtcgtcatgaggaacctgttctccagg
gagaccgacttcaagatgagaactgtgaagaagtccagagagaccagtttgagagagtct
gctgaacgcatggacctgagcaggaagatgcatgagaaagaacaattccaaaagaagatg
aacccagacagtttgactcaccccccagagttcatcgtgaaaccacgtggccagactgtg
tgggaggggaagagtgtgacactgcactgcacggtggctggatggccaaaaccccgtgtg
gcctggtacaaaaacaacgtgttaatcgatgctaaggctcaccctgagaaatacttcaca
gagagccaatacaacatgcattctctggaaatcaagaattgtaattttagcgatactgcc
gagtatcgaatctctgcacttaacgtgaagggagaaagctctgcgtttgcccctgtcatt
attaaaagattcaaagaaggagaagaggtgactgaaaggccccatggtttcagccctgaa
tacggtgtgaccttcaacactaccatcattgacaagtttgacgtttcttttggccgtgag
ggagagaccatgagcttgggctgtacagtcattgtctaccccactgtgaagcgctaccaa
ccagagatagtgtggtacagaaatggtgtcgccttgtcaccttctaagtgggtgcatatg
cactggagtggtgagcgagccactttgactcttgtgcatctgaataaagaagatgagggt
ctctatactctgcgtgtcaacaccaagtcaggcttcgacacccactctgcttatgtgttt
gtcagagatgctgatgtggaggaggagggggttcctgttgctccacttgatgtgcgttgt
catgacgccaataaagactatgtggttgttacctggaagcagcccgcagtggagggcagc
agttccatcatcggctacctcattgacaggttggaggttggcactcatcactgggcccag
tgtaatgacactccagtgaagtatgcccgttttcctgtcactgggcttattgagggccgc
tcctacacctttagggtgcgagctctcaacaattctggtgtgagccgcccgtcccgggcc
tctgaccctgtagttgccatggatccatcagaccgggcccgccttagagctgggccctcg
gctccatggactggaatgatcaaattcactgaggaagacccaacagtgggggtggttcct
ggttcacctactgacctggctgtcactgaggctactaagagttatgtggtactgagctgg
aagccacctgtccagagaggacatgagggtgtcatgtattatgtggagaagtgcttggtg
ggtacagatacatggcagagggtgaacaccgggatgccagtgaaatccccccgctttgcc
ctgttcgaccttgccgaaggcaaatcctacagcttccgtgtccgtagctgcaactctgcc
ggagttggagaggcgtcggaagaaactggggcgaccactgtgggagacagattggacttg
ccctctgtcccagggcctgttattcccatcagaaacactgacacatctgttgtggtgtgc
tggggggcgtctaaggaggttaagaatctggtgggctattacatcgaggtcagcgtcaat
ggcagtggcgtatgggctccctgcaacaacaagccagtcaaaggcactaggtttgtgtgc
cacgggctgaacactggggacaaatgcgtgtttagggtgaaggctgtgaacgctgcagga
tacagtggaagcagtgccgaatctgaggcctgcattgtacgagcaagcattgccgtccca
agccctcctgtcggtgtgaccctgcaggagagggtccgtgactacatggtgctgggctgg
caagctcctgctaaaactggtggggcagatgttagaggttactacctggattacagaaca
gtgaaggatggagtcgctagcaggtggcatgaaattaacctcaaggcagtcactagtaca
tcttacaaagtgactgacctgaaggaaaacctgttctaccagttccaggtgcgtgcagtc
aatcaggctggtattagtgaatcctccgtacccactgtcccattggagtgcaaggaatgg
actgtggctgttccaggtcctcctaatggcctccgtgtcctggaggtgcgcaaagactcc
atggtccttctgtgggagccacccacattcaatggtcgcagtcctgtgactggatattat
gtggactacaaggaagagaatggcagatggagatgtgtccaagagagatccacaaaaaat
acttacatgaaggtaactggtctccaagagggtgtttcctacaagctgcgtgtccatgct
aagaatctggcaggtgtaggtggaccctcaaagtcaactgatgcaattttggctgtgacc
cgccctggaaccaatgagattgttgtggatgtggacgatgatggtgtgatctctctgatc
tttgagtgcgccgatcttaaacaggactctcagtttgtgtggtccaaaaactacaaggcc
ctcactgacacttctcgtctcaccattcagacttctgagggcaagtccagagccatcttt
aatgacccatcgttggaagacttgggcacttactcttgtgttgtgaccaacgttgatggt
gtctctgccagctacacgctcactgaggaaggtcttaagcgcttgttggaaatcagccgt
gaccaccagttccccataattcccttcaaaagtgaaatggccattgagctgcaggagaag
ggtcgtgtgcgtttctgggccgaagttggcaagttcacttctaattgccaagtggaatat
gtcttcaatgataatatcattcatgaaggaaagaagtacacaatgaactttaacaaaagt
actggcattattgagatgttcatggacttactggaggttactgatgaaggaaccttcaca
ttcaaccttgttgatggcaaagcaactggtcgcaccagcttagtgcttattggagaagag
tttgctgagcttcagaagaagtctgagtttgagagagcagaatgggtcagaagacaaggt
cctcacttcgtggagtatctcagtttcgaggtcactgcagaatgtgacgtgcatctgaaa
tgcaaggttggaaacatcaaacctgccactgagattgcctggtttaaggatggaattgag
attgaagaggaagatgaggatgctaagaagatcggaaaatctgatgacgtcttgatcttt
gacattggcaagcttgttattaagagcgaaaaggcagagaaaacctgcaaaaagaaacct
gcagccgaagaaagtccaagcaagccaaaaatttcaaagaaggatgcaggaatatatgag
gttgatctgaaggatgaaagaggaaaggacaaaactttgctgaacctgacagatgcaggt
tatcaagcagtcctgaatgaagtatttagagttattgccaattcttcaaccgagctcaag
gttatgagcacagaacatggaatcattctctactcgttcgttgtgcactatattgaagat
ctccgtgttggctggcttcacaaagaatcaaagatctcccactcagacagagtgcagtgt
ggagtcaccggagaacagctgtggctcaaaattaacgagcccaccgagaaggataagggc
aaatatgctattgatatcttcgatggcaaaggcagcgtcaagagagttcttgacctgtca
ggacaagtatgggaggaagcatttgaagaattcaagaggctgaaggcggcggccatagca
gagagaaaccgtgcccgtgtggtgggcggcctgcctgatgtagtcaccattcaagagggc
aagtccctcaacctcactggcaacgtatggggtgatcctgttcccgaggtcagctgggtg
aagaacgacaaaccgctgttgcctgacgatcactatacgctgaagtttgagcacggcaag
tttgccagcatcaccattgctgctgttacaaccgtcgattcgggcaaatacgccctgctg
gtgaagaacaagtatggcacagaggcggcagagttcaccgtcagtgtctacatcccagag
gatgaagcagagaagaaggagtaa
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