Labeo rohita (rohu): 127154104
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Entry
127154104 CDS
T09007
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127154104
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
127154104
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_1
Ig_3
ig
LRR_LRWD1
LRR_14
Ig_2
LRR_EndoS
LRR_9
LRRNT
V-set
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
127154104
NCBI-ProteinID:
XP_050951468
LinkDB
All DBs
Position
2:complement(38422068..38483553)
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AA seq
605 aa
AA seq
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MASLWGLGRLGWLGLVLALTAVRCAGCPPRCDCAAQLRSVSCQRKRLSGVPEGIPTETRL
LDLSRNRLRWVAPGDLAPYPRLEELDLSENLISTLEPNAFASLQALRTLRLRGNQLKLVP
MGAFARLANLTTLDLSENKIVILLDYTFQDLRSLKNLEVGDNDLVYISHKAFSGLIGLED
LTIERCNLTSISGQTLSYLRNLVTLRLRHLSISALEDQNFRKLSALRGLEIDSWPYLEYI
SPLSFQGLNLSWLFITNTNISSVPSASFRNLAYLTALNLSYNPISTLESWAFRDLIRLKE
LHMVSTNLLTVEPHALGGLRQIRVLNLSNNDLVTLEESSFHSVNSLETLRVDGNPLSCDC
RLLWILQRRRTLNFDGKMPVCAGPPEVQGYLLSMFTDSALFDYFTCQKPKIRNRKLQQVT
AHEGQPVSFLCRAEGEPTPAIIWISPQRRRITSKSNGRITVLPGGTLEIRYAQVTDSGTY
ICIASNAGGNDTYFATLTVKGQPVDSALFVNRSLYAVDFNDTGLNSTRVFLKFTLDLTTI
LVSTAMGCITFLGVVLFCFLLLFVWSRGRGQRKNNFTVEYSFRKTEGPTTTGGSGGTRKF
NMKMI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcttcattatggggcctgggccggctggggtggctgggactggttctggccctgacg
gccgtgcggtgcgcgggctgccctcctcgctgtgactgcgcggcgcagctccgctccgtg
tcctgccagcgaaagcgcctgtccggcgtaccggagggcatcccgacagagaccaggctg
ctggacctcagccggaaccgcttgcgctgggtggctccgggagatctggctccgtacccg
cgtctggaggaactggatctgagcgagaacctcatcagcacgctggagcccaacgccttc
gccagcctgcaggccctgcggacgctgagactcagaggaaaccagctgaagctcgtgccc
atgggagccttcgcacgactggccaacctcaccacgctggacctgagtgagaacaagatc
gtcatcctgctcgactacaccttccaggatctgcgcagtctcaaaaacttggaggtgggt
gacaatgacctggtctacatctctcacaaggctttctcaggattgatcggtctggaagat
ttgaccatcgagaggtgcaacctgacgtccatatccggccagactctgtcttacctgcgt
aacctcgtcaccttgcgactgcgacacctcagcatctccgccctcgaggaccagaacttc
cgcaaactgtctgcgctgagaggcctggagatcgacagctggccgtacctggagtacatc
tcgccgctgagcttccagggcctcaatctgtcctggctcttcatcaccaacaccaacatc
agctccgtcccctcggcctccttcaggaacctggcctacctgacggccctgaacctctcc
tacaaccccatctccacgctcgagtcctgggcctttcgagacctcatcagactgaaggag
ctacacatggtcagcaccaacctgctcaccgtggagcctcacgctcttggaggtttgcgt
caaatccgagtcctgaatttgtccaacaacgatctggtgacgctggaggagagctccttc
cactcggtcaacagtctggagacgctccgggtggacgggaacccgctgtcctgcgactgc
cgtctgctgtggatcctgcagcgcagacgcaccttaaacttcgacgggaagatgccggtg
tgcgccggaccgccggaggttcagggttacctgttgagcatgttcaccgattcggcattg
ttcgactacttcacctgccagaagccgaagatccgcaaccggaagctgcagcaggtgacg
gcgcacgaaggccagccggtgtcgttcctgtgccgcgccgaaggagaaccgactccggcc
atcatctggatttcgccgcagaggagaaggatcacttccaaaagcaacggcaggattacg
gttctccccggcgggacgctggagatccgttacgcgcaggtcacggacagcggcacgtac
atctgcatcgccagcaacgcgggcggcaacgacacctacttcgccacgctgaccgtcaaa
gggcagccggtggattcggcgctcttcgtcaaccgctcgttgtacgcggtggacttcaac
gacaccgggctcaacagcacgcgcgttttcctcaagttcacgctggatttaaccaccatc
ctcgtgtccacggccatgggctgcatcaccttcctgggcgtggtgctcttctgcttcctg
ctgctgttcgtgtggagccgcgggcgcggacagcgcaagaacaacttcacggtggagtac
tcgttcaggaagactgaaggacccaccaccaccggcggatccggaggaacgcgcaagttc
aacatgaagatgatatga
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