Labeo rohita (rohu): 127154190
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Entry
127154190 CDS
T09007
Name
(RefSeq) LOW QUALITY PROTEIN: 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
127154190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127154190
Ion channels [BR:
lroh04040
]
Ligand-gated channels
Serotonin (5-HT3)
127154190
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
127154190
NCBI-ProteinID:
XP_050951556
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Position
22:12586725..12601519
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AA seq
532 aa
AA seq
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MRGERIHAQAFIRRTRQRQSENRQGQNNSKQVRGSRGGGFLQRLRPPSLMALLGDSTAQH
PRPSAVRYSSRPQFPWFMVMLSVXCLANMLRCEQGQSGPTYESLQEVIDKKSFRPSVNLS
TPTITNISFTLYAILGVNEKAQILTTFLWLRLYWFHEFLIWDSEACDGITKISLPVKDLW
TPDIIVYEFVDDDVSQACPYVYVNHTGHIRYDRMLRLVSACNLQIFSFPFDIQNCSFTFG
SYMHTIRDVRVSPALSFKEMTGNSKRYLQASGEWELVVILGDADILKFGIDEWDIITFWV
VIKRRPILYVVNLIIPSSFLMIIDILSFYLPPHSVDRSSFKMTLILGYTVFLLIMNDLLP
STANGTPLIGIYFSVCLALMTISLLETVLITCVLHHNSMKYREVPHWVQVLVMRFIARLI
CYSFPEDPLAKLEEKQETNPWVVQPSESTSSQQTSTNASGTMTLDVPELRQISQDLREMN
TYLSILRKEDHLQNQWCHVGYILDFLLFRVYLLIITGYALVIICMWCIWMNQ
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcgagcggatccatgcgcaagcttttattcgtagaacgagacagagacaaagt
gaaaacaggcagggtcaaaacaacagcaaacaggtccgaggctctaggggtggaggcttc
cttcagcggctacgtcctccttcgctcatggcacttctgggggattcaacagcccagcat
cctcgcccatcagccgtgcggtactcgtccaggccacagtttccctggtttatggtcatg
ttaagtgtcnnatgcctggcgaatatgcttcgctgtgaacaaggacaaagtggacccacg
tatgagtctctacaggaagtcattgacaaaaagtccttcagaccttctgtcaacctcagc
acccccaccataaccaacatctccttcactctctacgctattttgggagtgaatgaaaaa
gcacaaattcttaccacattcctctggctcaggctgtactggttccatgagttcctcatt
tgggattcagaagcctgtgatggcattacgaagatctctcttcctgtcaaagatctctgg
actcccgacattatcgtttatgagtttgtggatgacgacgtatctcaggcctgtccttat
gtgtacgtgaaccacacgggccacatccgctatgacaggatgttgaggctggttagcgct
tgtaacctacagatcttcagtttccctttcgacatacaaaactgctctttcacctttggc
tcctacatgcacaccataagggacgtccgtgtcagtcctgccctgtcctttaaggagatg
acaggaaattcaaagcgttacctgcaggccagtggagagtgggagctggtggttatcttg
ggcgacgctgacattttgaagtttggaatagatgaatgggacatcatcactttctgggtg
gtgataaagcgacggccaatattgtacgtggtgaacctgatcatccccagctccttcctc
atgatcattgacatcctgtcattctacttgccgccacacagcgtggatcgatcctccttc
aaaatgaccctcattctgggctatacagtctttcttctcattatgaatgacctgcttccc
agcactgccaatggaacacctttaataggtatctatttctccgtgtgtctggcactcatg
accataagcctactggagacggtcctcattacctgtgtcctccaccataattcaatgaaa
tacagggaggtgccgcattgggtccaggtgctagtgatgcgcttcattgctcgacttatt
tgctacagtttccctgaagaccctttagccaaactagaagagaaacaagaaaccaatcca
tgggtcgtccagccctcagaatcaacgtccagtcaacagacatccacaaatgcatctgga
actatgacactggatgtgcctgaactcagacagatcagtcaggatcttagagagatgaac
acttatttgtccattctacgaaaagaagatcatctacagaaccagtggtgccatgtgggc
tacatcctggacttccttctcttccgcgtttacctgttgataatcacaggatacgcactt
gtaatcatatgcatgtggtgcatttggatgaaccagtag
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