Labeo rohita (rohu): 127154222
Help
Entry
127154222 CDS
T09007
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
127154222 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127154222 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
lroh04131
]
127154222 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
lroh03029
]
127154222 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127154222 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
127154222 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
127154222 (si:dkey-110c1.10)
Membrane trafficking [BR:
lroh04131
]
Others
Actin-binding proteins
Myosins
127154222 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
lroh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
127154222 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
127154222 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
127154222
NCBI-ProteinID:
XP_050951591
LinkDB
All DBs
Position
22:29079263..29100278
Genome browser
AA seq
1654 aa
AA seq
DB search
MATTELYTKGACVWVPDPEAVWVSAQLLQDYHPGDKHILIQLTDGREMEYSVLPPAGLPP
LGNPDILEGENDLTALTFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVALNPYEQLPIYGE
EVIDAYSGQDMADMEPHIFSVAEEAYRTMISEEKNQSIIISGESGSGKTVSAKFTMRYFA
VVGGAAQQTSVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFGRKGDIIGANMRT
YLLEKSRVVFQAAQERNYHIFYQLCASRDLPELRTLKLDSAENFHYTNQGQDVHISGTDD
LVELERTRNAFTILGVQPDQQMEIFHILAAILHLGNVNIQASGRGGDRSYIDAKDHSLAI
FAKLLGVEGAQMAQWLCHRRLAVGGEMLVKPMTGQQANEARDALAKHVYEQLFTWTVQRL
NSSLRAHREQPKSFIGVLDIYGFETFDRNSFEQFCINYANEKLQQQFNRHVFQLEQEEYL
REELPWNRIEFSDNQPCIALIEGQLGLLDLLDEECRMPKGSDENWARKLYDHHLKQSPHF
RKPRMSNTAFIIVHFADMVQYECDGFLDKNRDTVFEEPINILRASQSELVAELFQKDSGG
GSLPNSSLANGSIRSGKRAHREHKLTVGFQFRQSLQLLMDTLNSTTPHYVRCIKSNDLKQ
PFLFDPKRAVQQLRACGVLETIRISAAGYPSRWTYEEFYARYRVLLDGSDSKDDVRRSCQ
SALPDLIPDPEQYCFGKTKVFFRAGQVAVMEKLRGDRLHAAGVLIQSWVRGWLQRRYYQR
LRWATFILQRYIRGTLARRLAWSLRYTRAALIIQKTYRMLAVRQLYLAIRKATVKIQAFV
RGTQARLIYRQMLTERAVVFLQARVRGWLARRSFRRIRAAVVLMQCCVRRRAARKELLRL
RAEARSVEKYRELNKGMEVKLMQLQLRADQQARESASLRETLQAEREAHSCELEQLRSSL
VKLQIQLQENANTAPSLTEKQEEDRRRSEEKAAQEILQLAQEIQALRVERDSLEKERDDL
AIRLQNQEKALEESHKQTVVQADASARAELDEERRRYQSLLREFTRLEQRYDNLRDMSLF
TTNERSRGHRRTDSTVSLESPSPVTTPFSNSPVFPSPEEVRRISVTSPTDKRPWRDEHPL
NILMEDMSIAKDTAESMKGEDLRYAYDAVRVANKFLERQLLSQRAQWEREISDLRMKLQQ
AQDRNTPGDPEINNLTEQVVVREQECVRLRQELKELKHTVSLRRILSYAGVAIAASQDPT
SPAPQKSQMLTGLLECRKKDESKLIKQLITDVRAEGVLSLPPGLAARVLFLCIRQADCSG
DQTRVKGLCSAAVSGIKTALKKHGNDLDVTAVWLKNAYLLKDLLNQHSPQQDVRGSEELV
PLVTDVTESVRALSDLCIQAYQQLLSIAESRLQPIIVPAMLESETIPGLAGSSVKLSTGR
KRAGSDARPPAPEGATMPGVLRELSALHTALSRQDLPSALHEQAFHQLMYLLAATALNSL
LLRKDMCCWNRGLQIRYNVSLLEEWLRSRSLQTGGAVTTLEPLIHAAQLLQMSKKTEADG
EAMVQACNALSNQQVVKILSLYTPQSDLEERVTLNFIRIVQGLLKGRSEGQPPQLLMDVR
RVFPVTFPYQPPPQVSAAQLEIPESLKISFLRRV
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccacagagctctacacaaagggagcatgtgtgtgggtgccagacccagaagct
gtgtgggtgtctgcccagctgcttcaagactaccatcctggagacaagcacatactaatc
caactcactgatggcagagagatggagtattctgtgttgcctccggcgggtcttccccct
ttaggtaaccctgatattttggagggagagaatgacctcacggctctaactttccttcac
gagccagctgtacttcacaacttgcgcgtgcgctttcttgactacagtagcatttatacc
tactgcgggattgtgttggtggcgttaaatccatacgaacagttgcccatctatggagaa
gaggtgattgatgcttacagcggccaagacatggctgatatggagccacacatcttttcc
gtggctgaagaggcgtaccgaactatgatcagtgaggaaaaaaatcaatccatcataatc
agtggagaatcaggctcaggtaaaactgtatctgctaaattcaccatgcgttactttgct
gtcgtgggtggtgcggcccagcagaccagtgtggaggagaaagttctggcatccaatcct
ataatggaggcaattggtaatgcgaaaacaaccagaaacgacaacagcagtcgttttgga
aagtatatcgagataggatttggacgtaaaggggatataattggcgcaaacatgaggacc
tacttgttggagaaatcaagagttgtttttcaggcagctcaagagagaaactaccacatc
ttctaccagctttgtgcttccagggatttaccagagttgaggacacttaaacttgattct
gcagaaaactttcattacaccaaccaaggacaagatgtgcacatttctggcacagatgat
ttggttgagcttgaacgaacaagaaatgcctttactattcttggagtgcaacctgaccag
cagatggagatatttcatatattggcagctattcttcatctggggaatgtcaacatacaa
gccagcggacgtggtggggaccgcagctacattgatgccaaggaccattccttggcaatc
tttgccaagcttttaggggtggaaggtgctcagatggcccaatggctatgccacaggcga
ctggcagtgggtggggaaatgcttgtgaagcccatgacaggccagcaggctaatgaagca
agggatgctctggctaagcatgtgtatgagcaactgttcacatggacggtgcagaggctc
aactcatccttaagagcacaccgggaacagcccaaatcttttataggagtacttgatatc
tatgggtttgagacttttgaccggaatagttttgagcaattctgtattaactatgcaaac
gagaaactccaacagcagttcaacaggcacgtgtttcagctggagcaggaggagtacctg
cgagaggaacttccctggaaccgtattgagttcagtgataaccagccatgcattgcactc
atcgaaggccagttgggcctacttgatcttctggatgaagaatgtaggatgcctaaaggc
tctgatgagaactgggcccggaagctttacgaccatcacctgaagcaaagccctcacttt
cgtaaaccacggatgtccaacactgccttcatcattgtgcactttgctgatatggtccag
tacgagtgtgatggctttttagacaagaaccgtgacactgtatttgaggagcccatcaat
atactgagagctagtcagtcagaactagttgccgagttgtttcagaaggattccggaggg
ggatccctccccaactcctctcttgcaaatgggagcatacgttcaggcaagagagctcac
cgagagcacaaattaactgtgggctttcagtttcgtcaatccctgcaacttttgatggac
accttgaacagcacaaccccgcattatgtccgctgcataaagtccaatgacctcaaacag
ccctttctttttgatcccaagcgagcagtacagcaattgcgagcatgtggagtcttggag
accatccgaatcagtgccgcaggctacccctccaggtggacatatgaggaattctatgct
cgttatcgggtgctgctagatggttctgattctaaggatgatgtgcgtcgttcttgccag
agtgcccttccagatctcatccctgatccggagcagtactgctttggtaagaccaaagtc
ttcttccgggctggacaggttgcagtaatggagaagctgagaggggatcggctacatgcg
gcaggggttttaatccaaagctgggtgagaggatggctgcagcgtaggtattatcagcgg
ctccggtgggccaccttcatcctgcagcggtacataagaggaaccctggcccgaaggttg
gcgtggagcctccgttatacacgtgctgctttaatcatacagaaaacataccgcatgctg
gctgtgcgacagctttatctggccatcagaaaggccactgtcaaaatccaggccttcgtc
agaggcactcaggcccgtctgatttatagacagatgctgacagagcgggcggtggtgttc
ttgcaggcgcgggttcgaggctggctggcccggcgcagtttcaggcgaatcagagctgca
gtggtcctcatgcagtgctgcgtacgcaggcgagcggcgcgaaaagagctgttgcgcctg
cgcgctgaggctcgatcggtggagaaatatagagaactcaataaaggcatggaagtcaaa
ctcatgcagctgcagctccgagccgaccaacaggcgagagagagtgcatctctgagggag
actctccaggctgagcgagaagctcacagctgtgagctggaacagctgcggtccagcctt
gtcaaacttcagatccagctgcaggagaatgcaaacactgctccttcacttacagaaaaa
caggaggaggacaggaggagatctgaggagaaagccgcccaagagattctccagcttgca
caggaaatccaagctctccgagttgagagggattctttggagaaagagagggatgatctg
gccattcgcttacagaatcaagaaaaggctctggaggagagccacaagcagactgtggtt
caggcagatgcatcagcgcgagcagagctggacgaggagaggaggagatatcagagttta
cttagagagttcacaagactagagcaaagatatgacaacctgagagacatgagcttattt
accaccaatgagcgttcacgtggacaccggcgaacagattcgactgtatctttggagtct
ccttcacccgtcaccacaccgttctccaactcgcccgttttcccttcacccgaggaggtc
aggaggatcagcgtgacgtcgcccactgacaagagaccctggagagatgaacaccctctg
aacatcctaatggaggatatgagcattgcgaaagacactgctgaaagtatgaagggagag
gatctcagatatgcctacgatgctgtacgggtggccaacaagtttctagagaggcagctg
ttgtctcagagagcgcagtgggagcgggagatatcagatctcaggatgaaactccaacag
gctcaagacagaaatacacctggagatcctgagataaataatctaacagagcaggtggtg
gttcgagaacaggaatgtgtccgtttgcggcaggaactcaaggaactgaaacacaccgtg
agcctcaggagaatcctgtcttatgcaggtgtagccatagctgcgtctcaggacccaaca
tctcctgcccctcagaagagccagatgctgaccggtctactggagtgcaggaaaaaagat
gagagcaaattgatcaaacagctcataacagacgtgagggcggagggcgtcttgtctttg
ccccctggactggcggctcgggttttgtttctatgcatacggcaggcagactgtagcggc
gatcagacgcgggtgaaggggctctgcagtgctgctgtgagcggcattaaaaccgcccta
aagaaacatggcaacgatctggacgtgacggctgtgtggctgaagaacgcttacctgctc
aaagacctgctcaaccagcactctccacaacaggatgtgaggggctcagaggagctggtt
cctctggtgacggacgtgacggagtctgtccgggcgctcagtgatctgtgcattcaggcc
tatcagcagctgctgtccatcgctgagagtcgcctacaacccatcattgtcccagcaatg
cttgaaagtgagaccattcctggtctggctggatcatcagtaaagctgagtaccggtcgt
aagcgtgcaggatcggacgctcgacctccagcccccgagggagcgactatgccaggggtc
ctgagggaactgtctgcactacatacagccctgtcccgtcaggatctgccctcggccctg
catgaacaagctttccatcagctcatgtacctgctggctgccaccgccctcaacagcctg
ctgctccgcaaggacatgtgctgctggaaccgcggcctgcagatcaggtataatgtgagt
ttgttggaggagtggctgcggagtcgttcgctgcagacagggggcgctgtgaccacgctg
gagccgctcatacatgcagcacagcttcttcaaatgagcaagaagactgaagctgacgga
gaagcaatggtccaagcctgcaatgcactgtccaaccagcaggttgtgaagattttaagc
ctctatacacctcagagtgaccttgaggagagagtaacactcaatttcatccgtatagtg
caggggctgctgaaggggcgttcggaggggcaacctccacagcttctgatggatgtcaga
cgggtattccccgtcacgttcccttatcagcctccaccgcaagtcagtgccgcccagctc
gaaatcccagagtccctcaagatctccttcctacgcagagtctga
DBGET
integrated database retrieval system
