Labeo rohita (rohu): 127154451
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Entry
127154451 CDS
T09007
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127154451 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127154451 (hnrnpa1b)
03041 Spliceosome [BR:
lroh03041
]
127154451 (hnrnpa1b)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127154451 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
127154451 (hnrnpa1b)
Spliceosome [BR:
lroh03041
]
Common components
Common spliceosomal components
hnRNP proteins
127154451 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_3
RBD_AKAP-17A
RRM_PARP14_1
Motif
Other DBs
NCBI-GeneID:
127154451
NCBI-ProteinID:
XP_050951928
LinkDB
All DBs
Position
23:complement(7476325..7480586)
Genome browser
AA seq
386 aa
AA seq
DB search
MSKEGQPREPEQLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFGFV
TYSNVTEVDAAMDARPHKVDGRLVEPKRAVSREDSNKPFAHTTVKKIFVGGIKDDTEENH
LRDYFKQFGKIEAIEIMVDHKTGNKRGFAFVTFDDHDSVDRIVIQKYHTVNGHNCEVRKA
LSKQEMQNTGMNMRGRGGGGGGGNFNRYGNNGGYNSDFGGGGGGGGGNRDGYFGRGGRGG
GGGGGYGGDCYNNGFGGGDGGYGGGPGNYGGNRGYGGGGGGGGHGYGNQGGGGGYGGGNS
GGGGYNDNYNNGNGNFGGGNFGGGGGSGGGNYSDFGNYNNQQSNYGPMKGNFGGGGGGGR
NSGPYGGGYGGGSGGGYGGGSGGRRF
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagagggccaaccacgtgagcctgagcagctgcggaagctcttcattggaggg
cttagctttgaaaccacggacgatagtttgcgggcacattttgaacaatggggcacctta
acggattgtgtggtaatgaaagatccaaacaccaaacgctccaggggctttgggtttgtc
acttattccaacgtgactgaagtcgatgccgctatggatgcacgtcctcacaaggtcgac
ggtaggctcgtggagcccaagcgagctgtgtctcgagaggactccaacaagccatttgct
cacacaactgtgaagaagatctttgtgggtggcattaaggatgacacagaggagaaccat
cttcgtgactacttcaaacagtttggcaaaatcgaggccattgaaatcatggttgaccat
aagaccggaaacaaaagaggctttgcctttgttacatttgacgaccacgactccgttgat
cgtatcgtcattcaaaaataccacactgtgaatgggcacaactgtgaagtcagaaaagct
ctgtctaaacaagagatgcagaacactggcatgaacatgagaggccgtggtggtggagga
ggcggtggaaacttcaacagatacggcaacaatggcggctacaacagtgactttggcgga
ggcggtggtggtggcggcggcaaccgcgatggctattttggaagaggaggcagaggtggt
ggaggtggcggcggttatggaggtgactgctacaacaacggatttggtggcggagatggt
ggttatggtggtggtcctggcaactatggtggaaaccgtggatatggcggtggtggcgga
ggaggagggcatggttatggcaaccagggaggtggtggtggttatggtggcggcaacagc
ggtggtggcggctataatgacaattacaacaatggcaatggcaactttggaggtggcaac
tttggaggaggtggtggcagtggaggtggtaactacagtgactttggcaactataacaac
cagcagtccaactacggtcccatgaaagggaactttggaggtggtggcggcggaggaaga
aacagtggcccatatggtggtggctatggcggtggatctggtggcggatacggtggcggc
tctggtggtagacggttttaa
DBGET
integrated database retrieval system
