Labeo rohita (rohu): 127154454
Help
Entry
127154454 CDS
T09007
Symbol
lama5
Name
(RefSeq) laminin subunit alpha-5 isoform X1
KO
K06240
laminin, alpha 3/5
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127154454 (lama5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127154454 (lama5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
Laminin_I
Laminin_B
Laminin_II
Laminin_G_2
Laminin_G_1
EzrA
ATG17_like
Motif
Other DBs
NCBI-GeneID:
127154454
NCBI-ProteinID:
XP_050951932
LinkDB
All DBs
Position
23:complement(22505877..22580546)
Genome browser
AA seq
3018 aa
AA seq
DB search
MARGPSRGTSRALVLVFLSLLFIEALTAQELPINGVNGFSLHPPYFNLAEGTKITATATC
GVDENELPIQDLYCKLVGGPVSGDPSQTIQGQYCDICTSEDTNRAHPINNAIDGTERWWQ
SPPLSRSVKYNEVNVTLDLGQLFHVAYVLIKFANSPRPDLWVLERSIDFGKTYQPWQFFA
SSKRDCIERFGQRTIERINHDDDIICTTEYSRIVPLENGEIVVSLVNGRPGAMNFSYSPV
LREFTKATNIRLRFLRTNTLLGHLMGKALRDPTVTRRYYYSIKDISIGGRCVCNGHAEAC
NAQDPNDPYKLQCDCQHNTCGTSCDRCCPGFNQFPWKPATTYSANECEPCNCHRHSSECY
YDPEINQRRASLNTQGEYRGGGVCIECQHHTTGINCERCIPGYYRSPDHPLDSPFACSEC
HCKSAFTDGTCEDLTGRCYCKPNYTGENCDTCAEGYEGFPECYQVYISGEARPAGEIINC
ECSAAGTEGNSCRPDPRTNTCVCKPEFTGEHCDTCAPGHFGLNCQRCQCSSQGCLDGSCD
AVTGQCVCRSGFQGYSCEQCAPGYFSYPLCQYCGCSAVGTLPEICDVAGQCLCRSEFTGP
RCDQCRSGFHSYPNCQVCTCDPRTSLDSSCTLSGQCNCRPNYSGPKCEQCASGYYAYPSC
TPCQCSVEGSRFSTCDPVSGQCFCLPNIVGQRCDSCSPGSYGFPLCQVGTCNPAGSVHND
ILPTVGSCQCRPNVEGVACDRCKPLYWNLSPDTVYGCSNCDCNTVGTLSEVAECTQSTGQ
CYCKPNVCSGTCNVCKDGYFNLQKDNYFGCQGCQCDIGGSVRQACDERYGRCRCRPNVEG
PKCNQPRPDHYFPDLHHMKFEVEEGTTVDGRPVRFGYNPLEFENFSWRGYAQMSPIQPRV
LVEVVVGFPDLFHVVLHYVNRGGVDVRGRVSVIEDGRHFLCGNCSEQSKQIVFAPTSEPT
FVNVPQNSFVEPFVLNPGTWTVIIEAEGILLDYLVLLPSAYYEAPILQLQVTEPCSYSNT
QDGSQNCLQYMYLALDEFPSISSNDANCRSDNHVPRPCHTEKITPRHPSMAICSGNDMNV
QLRGRVPVPGEYVLVVEYASEDQLPQTFNVSVNSPGESTHQEEITLLHCKYSFLCRAVAV
DDKKRVAIFTLSTEADIQLTTDRSSFFLHKVFLIPRAQFTMEYLKPRVHCISTHGHFSPD
SGSCIPSRFQNPPQSLVLKEGQASSVPDSNQASILDPTLYGDRPTTSRPPTAADNSEHML
LDPNQNAVMFSTHVHALGRYVFILHYHQPLHPTYNIQVHINGGRIWQGHVNASFCPHGYG
CRSVVMSENQIILDVTDHEVILTLRVQDTKTLWLDYVLVVPESSYSSSFLSEEPLDKSYD
FISNCGQNSFYINPSTAPPFCRNSAVSLSAFFNNGAVPCGCHEVGAESDTCETFGGQCKC
KPNVIGRDCSQCATGYYGFPNCRPCNCGTRLCEPVTGECICPPRTLQPDCVTCEPQTFGC
HPLVGCEMCNCSRPGVASLDIGCDTNNGQCSCRNNIVGRQCDKCAPGFYGYPNCRPCDCS
EAGTERDICDSITGRCLCKENVEGSRCDQCKLGTFHLDPTNAKGCTKCFCFGATDRCRSS
DKRRSEIMDMAGWVLLRSDRQEVPVSTYLDQDLVEADLSDVPDVSQDLHWHAPDAYLGDK
VSSYGGYLRYGLHTQTMRGDAFLIVETTRPDIILKGNQMTLVYMEREYSSAEDPHEGIVH
LVEESFRHAQTGNSVSREELMMVLVALESLQIRALHSQSAQSVSLRAAVLEGADNLPSGS
HANNVEICLCPGNYLGDSCQKCAPGYYRDTKGLFLGKCVPCNCNGHSDECLDGSGICVNC
RHNTAGNHCEQCQGGFHGNNTVDGHAVSCSSCPCPLQVASNNFAIRCVERPSQMKCLCRP
GYAGSKCERCAPGYYGNPMVIGSTCQPCNCNGNSDPNMLFSDCHPLTGECQSCMHNSAGP
HCEICAPGFYGDAITAKNCTRCNCSPCGTAHCDPHTGQCHCKPGVVGAHCDRCENGAFGF
DLCAGCRKCDCDAAAALVQPCDPVNGTCACQPGVNGPNCRQCAPGYWGYSPNGCKKCECR
GGRCDPRTGECHCAAGLTGRQCDTCLNKYSIPVLHRADVHCQPCDSCVMVLLEDLDKVNE
RYQSIAHQLSSLNASSIAWAQLNRLNASMENIANAIRNYNSTLDKSRDQANMLEGELQII
DTDIAELEEKAAATQKKGDALEDNTNSTHSRAQDLLEFISGIMGDVQGIILQMNRTAQNE
TSLIDEKELAGKIAEVESMLRDMRFRGFDFQKKLAENELDQANKLVDRVINEIANQTLNN
EAVAENIRNKLNQFSQQLMDLRDAMNEAVKNTANAVEANNINQKRMEELQNLVNNLLKNQ
KEVENQLQMAEDDVTQVNDLLSMLQDSKEDYERLAAQLDGARQPLAEKVQKYAPAANKIP
LVEAAEKHAEMLDQLANNLSSLISGSNQDGFIQRALNASHAYTNIINSVLEAEAAAKKAN
EAATEALENIKDKDLPLQAAALKNQSNELIKEAEELNNNSQSLKPRVDSIQKKLQDAEKK
KEKMLQDLKNIQNNLNTSREDIANDITAAKSAVEQANNTVANVSNALAPIQKQLEEWQKQ
YGDSNATSDEINKALSDANTSVAALSDTLPRLIKKLDRLHNSSFQPSNISDSIQRIRQLI
EQARNAAKKVGVSMQFDGNSGVQVRTPSNVAALASYSSLHMYIKLPRTPTKPDIKPQFVF
YLGNKDPTKDYMAMMLEGSKLRWYFNVGGETAYLLMPEDVKNDFFNKVILERTLQYGQMA
MSTDSEETIIVKQNVEAKGEKGLLNLPAEETVFYVGSYPSTFTPPMDLNMTSPNFFKGCL
ELLSLNEELVSLYNFEQNLQMNTTTNIPCSRKRPSNTPEWVVNGVYFDGSGYVEVSLDSL
KADSLFEQHVKITSQNGILLLFKRDDKYVCIAVQGGLLNVLHNLNGSLTSLIDPQQQSKI
KISNAQPKFLDVIFQPKK
NT seq
9057 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaggaccgtcacgggggacgtcgcgggcactggtgcttgtgtttctgtcgctg
ctgttcattgaagctttaacggcacaggagttgcccatcaacggcgtgaacggattcagt
ctgcacccaccgtattttaatctagcggaggggacgaaaatcacggcaactgcaacctgc
ggagtggacgagaacgagctgccgattcaggacctgtactgcaaactggtcggggggccc
gtgtcaggggatccgagtcagactattcagggccagtactgcgacatctgcacctcagaa
gacaccaacagagcgcatcccattaacaatgcgatcgatggcaccgaacgatggtggcaa
agccctcctctctcccgcagtgtaaaatacaatgaggtcaatgtcaccctggacttagga
cagcttttccatgttgcatatgtgctcatcaagtttgccaactcgccccggccagatctg
tgggtgctggagcgctccattgactttgggaaaacatatcagccatggcagttcttcgcc
tcctctaagagagactgtatcgagcggtttggccagaggaccattgagaggatcaaccat
gatgacgatatcatctgcacaacagagtactcacggattgtccctttggagaatggagag
atcgtggtgtctctggtgaatggacgtccgggcgctatgaacttctcttactctcctgtt
ttgagggagttcaccaaggccaccaacattcgcctgcgcttcctgcgcaccaacacgctg
ctggggcacctgatgggcaaagccctgagagaccccacggtcacacgtagatattactac
agtattaaagacatcagtattggaggaagatgtgtgtgtaatggtcacgctgaggcctgt
aatgctcaagaccccaatgacccatacaagcttcagtgtgactgccagcacaacacttgc
gggacatcatgtgatcgctgttgccccggcttcaaccagtttccgtggaaaccggctacg
acttacagtgccaatgaatgtgaaccatgtaactgccacagacactcatcagagtgctac
tatgatccagagatcaaccaacggagagccagtctcaacacgcagggagaatacaggggt
ggaggagtgtgtatcgaatgccagcatcacaccacaggcatcaactgtgagcgctgtatt
cctggatactacagatcacctgatcatcctctggattccccatttgcctgttcagagtgt
cactgcaagtctgcgtttactgatggcacatgtgaggatctgactggacgctgttactgt
aaacccaactacactggcgaaaactgtgacacgtgtgcagagggatacgaaggcttccca
gaatgctaccaggtctacatcagtggagaggccagacctgcaggggaaatcatcaactgt
gagtgcagcgctgcgggtacagaaggaaactcttgcaggccggaccctcgcaccaataca
tgtgtgtgtaaacctgaattcactggagaacactgtgacacctgtgctcctggtcatttt
ggcctcaactgccagcgctgtcagtgttcaagccagggttgcctggatgggtcctgcgat
gcagtaacgggccagtgtgtgtgtcggagcgggtttcaggggtattcatgcgagcagtgt
gcgcccggctacttcagctacccactgtgccaatattgtggttgcagcgctgtgggtaca
ttgcctgagatatgtgatgtggctggtcagtgtttgtgcaggtcggagttcactggtcct
cgctgtgatcagtgtcgctcagggttccactcatatccaaactgccaggtgtgcacttgt
gatcctcgtacatctttggactccagctgtaccctttcgggtcagtgtaactgcagaccc
aactacagtggtcccaaatgtgagcagtgtgcatctggatactacgcctatcccagctgc
acaccatgtcagtgttcagtggagggctctcgcttcagcacgtgtgatccagtgtctggt
cagtgtttttgtctgccaaacattgtgggtcagaggtgtgatagctgcagtcctgggtca
tatggcttccccctttgccaagttgggacctgtaacccagcaggctctgttcataatgac
atcctgcctactgtgggctcctgccagtgtcggcctaatgtagagggggtggcgtgtgat
cgctgtaagcctctctactggaatctttctcctgatacagtctatggatgctcaaactgt
gactgtaatacagtaggaactctgagcgaggttgcagagtgcactcagagcaccggccag
tgttactgtaaacccaacgtgtgcagcggcacatgtaacgtgtgcaaagatggatacttc
aaccttcagaaggataattactttgggtgccaaggttgccagtgtgacattggaggctct
gttaggcaggcgtgtgatgaaaggtacgggcggtgtcgatgcagacccaatgtggaggga
cccaaatgcaaccaacctcggccagatcattatttcccagacctgcaccatatgaagttc
gaggtggaggaaggcaccactgtggatggacgtccagtgaggtttggttacaatcctctg
gagtttgagaacttcagctggaggggatacgctcagatgtcccccatacagcctcgggtt
ctggttgaggtggtggttggctttccagacctgtttcatgtggtcttgcactatgtgaac
cgtgggggcgtggacgtgagggggcgggtctctgtgatcgaggatggcagacacttcctg
tgtgggaactgctctgagcagtccaaacagatcgtctttgcacccacttcagaacccacg
tttgtgaacgtgcctcagaacagtttcgtggagccatttgtcttgaacccaggaacctgg
actgttattatcgaggcggagggcattttacttgactacttggtgctgttgcccagtgca
tattacgaggctcctatcctgcaacttcaagtgactgaaccctgttcatacagcaacaca
caggacggcagtcagaactgtctgcaatacatgtatctggctctggatgagttcccatcc
atctccagcaatgatgccaattgcaggtctgataatcacgtgcccagaccctgccacact
gaaaagatcactcctcgccatcccagcatggccatctgcagcggcaatgatatgaacgtt
cagctgcgtggtcgtgttcctgttcctggagagtatgtgttagtggtcgagtacgccagt
gaagaccaactccctcaaactttcaatgtgtctgtcaactcaccgggtgaaagcactcac
caagaggaaataaccctgctccactgcaaatacagtttcctgtgccgtgcagtggctgta
gatgacaagaagcgcgtggcgatcttcactctctccacagaggctgatatccagcttacc
accgacaggagcagctttttccttcacaaagtgttcctcattcctcgtgctcagttcacc
atggagtacctgaagccaagagttcactgcatcagcacacatgggcacttctctccagac
agtggttcctgcatcccgtctcgtttccagaatcctcctcagtctctggtcctaaaagaa
ggtcaggcttcttctgtgccagattcgaaccaggcttcaattcttgatcccaccctttat
ggagacagacctacgacttccagaccgccaaccgctgctgataacagtgaacacatgctt
ctggatcctaatcagaatgctgtaatgttttcaacacatgtacatgcactgggccgttat
gtgttcattctgcattaccatcagccccttcacccaacttacaacatccaggtccacatc
aatggaggacgcatatggcaaggtcacgtcaacgcatccttttgtccccatggttatggt
tgtcgcagtgttgttatgtcagagaaccagattatcctggatgtgacggaccatgaggtc
atcctaaccctgcgtgttcaagacacaaagacactgtggctggactatgtgctggtggtg
ccagagagctcttacagctccagctttttgtctgaggagccactggacaaatcctacgac
ttcatcagcaactgtggacaaaacagcttttacatcaacccgtccacagcgcctccattc
tgtcgcaactcagccgtgtctctgtctgcgttcttcaataatggcgctgtgccctgcggc
tgtcatgaggtgggtgcagagagcgatacctgcgagaccttcggtggacagtgcaagtgc
aaacccaatgtgattggccgagactgttcccagtgtgccacgggatactacggctttcct
aactgtagaccatgcaattgtggtactcgtctgtgtgagcctgtgacgggtgagtgcatc
tgtcctccacggactctgcagcccgactgtgtcacctgtgaaccccagacatttggctgc
catcctctggtggggtgtgagatgtgcaactgctccagacctggagtggcttcactggac
atcggctgtgacacaaacaacggccagtgcagttgcaggaacaatattgttggccgtcag
tgtgacaagtgtgccccgggtttctatgggtaccccaactgcagaccatgtgactgtagc
gaggcaggaactgagagagatatctgtgactccatcaccggacgctgtttatgcaaggaa
aatgtggaaggctctcgctgtgaccagtgcaaactgggaacgttccatttggaccccacc
aatgctaaaggctgcaccaagtgcttctgctttggagccactgaccgctgccgcagctct
gacaaacggaggagtgagatcatggacatggctggctgggtgctactgagaagtgacaga
caggaagtgcctgtgtctacatatctggatcaagatctggtggaggctgatctgagtgac
gtacctgatgtctcacaggacctccactggcatgctcctgacgcttacctcggcgataaa
gtgtcgtcctacggaggttatctgcgctacggcttgcatacccagacaatgagaggtgat
gcttttctgattgttgagaccacacgtcctgatattatacttaaggggaatcagatgact
ctggtgtacatggaaagagagtattcttctgctgaagacccacatgagggaatcgtccac
ctggtggaggagagtttcaggcacgctcagacagggaactctgtgtcccgtgaggagctg
atgatggtgttggtggcactggagtcactgcagatcagagcactgcactctcagtctgcc
cagtctgtgtccctacgcgctgctgtgctggagggggccgacaacctgccctctggtagc
catgcaaacaatgttgaaatttgtctctgccctggaaactatctaggagactcctgtcag
aaatgtgctccaggctactacagagacactaaaggcctgttccttgggaagtgtgtcccc
tgtaactgtaacggtcactctgatgagtgtctggatggctctggcatatgtgtgaactgc
cgccacaataccgctggaaatcattgtgagcagtgccagggcggttttcatggtaacaac
actgttgatggccacgcggtgtcctgctccagctgcccctgcccgctccaagtggcttca
aacaattttgccattcgttgtgtggagaggcccagtcaaatgaagtgtctgtgtaggcct
ggctatgctggatccaagtgtgagaggtgtgcaccaggttactatggaaatccaatggta
attggcagcacatgtcagccgtgcaactgcaatggaaactcagaccccaacatgctgttc
agcgactgccaccctttgaccggcgagtgtcagagctgcatgcataactccgccgggccg
cactgtgaaatctgcgcccctggtttttacggtgatgccatcactgccaagaactgcact
cgatgcaactgttctccttgtggcactgcacattgtgaccctcacacggggcagtgccac
tgtaagcctggtgtggtgggagcccactgtgaccgctgtgagaatggggcatttggcttt
gatttatgcgctggttgccgtaagtgtgattgcgatgcagcagcggctttagttcagcca
tgtgatcctgtaaatggcacgtgtgcctgtcagcctggggttaatggaccgaactgccgc
cagtgtgctccaggttactggggctacagccctaatggctgcaagaagtgtgagtgtaga
ggaggccgctgtgatcctcgcacaggagagtgccactgtgctgcaggtctgacagggagg
cagtgtgacacgtgtcttaataaatacagtattcctgtgcttcatagagcagatgtgcac
tgtcagccctgtgacagctgtgtgatggtgctattggaggatctggacaaagtaaacgaa
cgttatcagtccattgcccatcagctgagcagcctcaatgccagctcaatcgcctgggct
caactaaaccgcctcaatgcgtcaatggagaacatcgctaatgccataagaaactacaac
agcactctggacaagagcagggaccaggccaatatgctggagggagagctgcaaatcatc
gacactgatattgctgagttagaggagaaggccgcagccacacaaaagaaaggcgatgct
ttagaggacaacactaactccacacactctagagcacaagatctgcttgaattcatcagt
ggcatcatgggagatgtgcaaggtattatactgcagatgaataggacagcgcagaatgag
accagcttgatcgatgagaaggagcttgctggaaagatagcagaggtggagtccatgctc
agagacatgcgcttcaggggcttcgacttccagaagaaactagcagaaaatgagctggat
caggccaacaagttggtagatcgtgtgataaatgagattgcaaaccagacactaaataat
gaggctgtggcagagaacatcagaaacaaactgaaccagttcagtcagcagctgatggac
ctgagagacgctatgaatgaggccgtcaaaaacacagcaaacgccgtagaggccaacaat
attaaccagaaacgcatggaggagttgcagaacttagtaaataacctgcttaagaaccag
aaggaggtggagaaccagcttcagatggcagaggatgatgtgacccaggtcaacgacttg
ctctccatgctccaggactccaaagaggactatgagcgactggctgctcagttggatgga
gcgaggcagcctctagctgagaaggtgcagaaatatgctcccgccgccaataaaattccc
ctggtggaggctgcagaaaaacacgctgaaatgctggaccagctcgccaataatctttcc
agtctaatatctggctccaatcaagacggtttcatacagcgtgctctgaacgcatctcat
gcgtacactaacattataaacagcgtgctggaagctgaggctgcagctaagaaagccaat
gaagctgctactgaggctctggagaacataaaggacaaagacctgcccctacaagctgct
gcactgaagaatcagagtaatgagcttataaaggaagctgaggaactgaataacaacagt
caaagtctaaaaccacgtgtggactccatacagaaaaaattgcaggatgctgaaaagaag
aaagagaagatgctccaagacctaaagaacattcagaataacctcaacaccagccgagaa
gacatagcaaacgacatcacagcagctaagagcgcagtggagcaagctaacaacacggtg
gccaatgttagcaatgcgctggctcctattcaaaagcagctggaggaatggcagaagcag
tatggagactcaaacgccaccagtgacgaaatcaacaaagccctcagtgacgccaatacg
tcagtggcggcgctgagcgacactcttcctcggctcataaagaagttggatcgtctgcac
aactcctcatttcagccgtccaacatctccgacagtatccagagaatccggcagctcatt
gaacaggctcgcaatgctgccaagaaggtgggcgtgtcaatgcagtttgacggtaactca
ggagtacaagtgaggacgcccagtaatgtggccgccctggcatcctattcatcactacac
atgtacattaagctaccacgtacccccacaaaacctgacatcaaaccccagtttgtcttc
taccttggaaacaaagaccccactaaagactatatggcaatgatgctggaaggatcaaag
ctgcggtggtactttaacgtggggggagaaactgcgtatcttctaatgcctgaggatgtg
aaaaatgatttcttcaacaaagttatcttggagaggactctacagtatggtcagatggca
atgtccacagattcagaagaaacaataatagttaaacaaaacgtggaggcaaaaggagaa
aaaggcctgctcaacttaccagccgaggagactgtgttttatgttggatcttatcccagc
acatttactcctccaatggatctgaacatgacgtctcctaactttttcaagggctgcctg
gagttattaagtctaaatgaagaactagtcagcctctataactttgagcaaaacttgcaa
atgaacaccacaactaacatcccttgttcaaggaagaggccatcgaatactcctgagtgg
gtagtcaacggagtgtattttgatggctcgggctacgttgaggtttcgttagacagttta
aaggccgacagtttgtttgagcagcatgtcaaaatcacctcgcaaaatggcattctcctg
ttgttcaaaagagatgataaatatgtgtgcatagcagtacaaggaggtcttcttaatgtc
ctccataaccttaatggaagtttgaccagcttaattgaccctcaacaacagtcaaaaatt
aaaattagtaatgcgcagccgaaatttttggatgttatctttcaaccgaaaaaatga
DBGET
integrated database retrieval system
