Labeo rohita (rohu): 127154476
Help
Entry
127154476 CDS
T09007
Symbol
asxl1
Name
(RefSeq) putative Polycomb group protein ASXL1 isoform X1
KO
K11471
additional sex combs-like protein
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127154476 (asxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127154476 (asxl1)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
127154476 (asxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASXH
PHD_3
Motif
Other DBs
NCBI-GeneID:
127154476
NCBI-ProteinID:
XP_050951978
LinkDB
All DBs
Position
23:complement(11299642..11320581)
Genome browser
AA seq
1606 aa
AA seq
DB search
MLHSQVRGDRVKNSIFFKLPGRMSLFTLKKNAPQWTKSPTANESGDGTGTPTASTTSTVE
GAEQESCDSTETAAASGENDASVDETSSSASCSTEPQTRLSRSSQSGRQRKKAVMMPRVV
LTPLKVNGEHVPSGAAGRRREGSRGGPGPTLRTRSELGWKRTQHFKSIRGLRSGPMKRNR
GGVEVDFETPGSILVNTNIRALINTRTFAAFPSHSQQQLLQLLPEVDRQVGPDGLARLSS
SALNNEFFTHASQSWKERLAEGEFTHEMQVRFRQEMEKEKKVEAWKEKFFEEYHGQRSGL
TREEALKLTMSDAGDVAGAVLDSDTATVATPKRRSVGRRRREGRIRRRSRADLRRRARRT
LCKTTTPTVPSAETTESTPTPDVEPSVASPVPEATAVQAEVVLQTDLGLEAPEENLSPEA
VPSPAPVPTPPPASTSSTCDEPEASTRLLPEVPEPVVASTSSPSSSSSSTSSSSSPSSSP
SSASERQTFAASSDSSSSSSSSTAAVATDPLDDGASVITTGTAGTGASSRESSPAASPAT
ASPAIQLKEQKRRPDESQAFTSFPEKRARLDERQSFRNTVDCVHSEKPQPTTEEPKVPPI
RLSRIKPPWVKGPPTYQICPRIVPPSEGSRRSGTGARTLADIKARAQQARAQREAAAAVA
ASGDGGGPGGSGPGGGTGIPDRSSGRRSREHPGPVEPGGGGGGRRGGRVDLEEQESPASS
HSSGAQLQLSSVDSADRPQTSTPLTEPSPSSVSSNPSLPTSESPKTLTLSPPATDSPASQ
DQVEEICGVEEVTACPSDKASEQTLDTPVPTPSEPESFCSHQEGRGEEAESSESRTTTPV
CTSASNDAISLVPTSIPDSLPRFGAQGVDVIRTLAASSQSWEGEKNGGEHHPGTTGVIQH
GSDLKMPKETLVTARNGWVESSEEHSMRDGMLHEHRNGGSDADGKYESASLPCLPSNAGE
EDTGAHSDSTETASDFENETQEDETVDWHGNQMGSNGMQAQNTKSQNQPVIQTSSRLTSS
MLNPPQHQQPVIQAHVSNPNHTQTVIQARFPNGVPNQPVIHPHKQHPIHTHAINHAQDQI
PTAPSQAQVQAYLTQAERDQSRNLRLNDNSNGVKLFVSTEDDSKPLGREDFVLKNSVPPV
GRRVQGTSRPVSSVEANNPLVTQLLQGSLPLEKVLPQPHSVSKLEINRLPGAPAGNSTSR
QPLRNLGPRFRGPSESGGPMETGGSDFQHKAPSTRVSPGPGRNFGSSPPGSTPSRMACLF
EESSPRSTNVQFASQPGGAVPPGAVPVITSLPSNSSARTSMDMNSHNAPVYESAVIKEHP
GPLPPRGETPERPVGFQQHPNNLSQSVCRTTPDAPSPPHGDLCPSEVVPTVKINWRPSKP
QPPQHLTYQQQLSPVATVKNEVSSRPSCQQALTKNSPAPNSGNTSVVITKKEPLDNFHGG
GGAMEGLLNMEMSLVRMAKKEQVKNPYGRQADTSASPVSSSPSSSASSLPYQLYGKLPKL
QQSGGNGGSSSGFSYTANVSVVDGSGFSRSLADGVLQLRPRVSVGNSGGQNATLSIQAFA
DSAAEEVALKCSCRLKAMIMCQGCGAFCHDDCIGPSKLCVSCLVVR
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgcttcactctcaggtcagaggagacagagtgaagaacagtattttcttcaagcttcct
ggaaggatgagtttgtttaccctaaagaaaaatgcacctcagtggacaaagagcccgacc
gcgaacgagtctggagatgggactggcactccaacagcatccaccacatcaacagttgaa
ggagcagagcaggagagttgtgactccacagagacggctgctgctagtggtgaaaatgat
gcctctgtggatgagacttcctccagtgcttcttgctccacagaaccacaaacaagactc
agtcgctcctcacagtcagggaggcagaggaagaaagctgtgatgatgccccgtgtagtg
ctcactcctctcaaggtcaacggtgaacacgtcccatcaggagcagcggggaggcgcagg
gaaggctctagggggggtccaggccccactctccgtacccgctccgagctgggctggaaa
cgcacccagcacttcaagagcatacgtggtcttcgttcaggtcccatgaaaaggaatcga
ggaggtgtggaggtggattttgagactccaggctccatcctagtcaacacgaacattcgt
gctctcatcaacacgcgcacctttgctgcttttccttctcactcccagcagcaactgctt
cagctgttaccagaagtggacagacaggttggccctgatggccttgctcggctaagcagc
tcggccctcaataatgagttctttactcatgcatcccagagctggaaagagcgtctagct
gagggtgagttcacacatgagatgcaggttcgcttcaggcaagagatggaaaaggagaag
aaagtagaagcatggaaggaaaaattctttgaggagtaccatggccaaaggtctgggttg
acgagagaagaggcattaaagctgacaatgagtgatgctggagatgttgctggtgcagtt
cttgactctgatactgctacagtggctacacccaagaggcgaagtgttggaagaagacgg
agggaaggccgtatcagacggcgttcacgggctgacctcagacgcagggctcggcgcaca
ctttgcaaaactacaacaccaactgtaccttctgcagagacaacggaaagcactccaact
cctgatgttgaaccatcagttgcatcaccagtcccagaagcaacagcagtgcaggcagag
gtggttcttcaaacagaccttggactggaagctccagaagaaaacctttctccagaggca
gttccctcccctgctcctgtacccacacctcctccagcttctacaagctcaacctgcgat
gaaccagaagcctccacacgcctgttgcctgaagtacccgaaccagttgttgcatccacc
tcctctccttcctcatcctcctcttcaacatcgtcgtcatcatcaccctcttcttctccc
tcttctgcctcagaaagacagacttttgctgcaagctccgattcctcttcttcctcttcc
tcctccactgctgctgttgccaccgacccgctggatgacggggcttcggtcattaccacc
ggtacagcaggcactggcgcaagcagccgggagagcagccccgcagccagtcccgccaca
gcaagtccagcaattcagctcaaggagcagaagagaaggccagacgagtcccaggccttc
accagctttcccgagaaaagggcgcggctggatgagcgtcagtcctttcgtaacacagtt
gactgtgtgcactcagaaaagccacaacctacaacagaggagcccaaggtcccgccaatc
cggctctcccggatcaaaccgccctgggtcaaggggccgccaacgtaccaaatctgtccc
cgcatcgtcccccccagcgaagggtcgcggcgctctgggacaggggcgcgcaccctggcg
gacatcaaggcccgtgcacagcaagcccgtgcccagcgggaagccgctgctgctgttgca
gcctctggggatgggggagggcctggggggagcggcccggggggtggtactgggataccg
gatcgctccagcgggaggcgttcgagagagcacccaggtcccgttgaacctggaggagga
ggaggaggaagacgaggaggaagagttgatctggaggagcaggaatcgcctgcgagctct
cattcgtctggagcacaactacagctatccagtgtagattcagcagacaggcctcaaacc
tccaccccgctcaccgaaccatctccttcctccgtgtcttcaaacccatctctaccaaca
tcagagtctccgaaaacactcacgctatcaccacctgcgaccgacagccctgcttcccag
gatcaggtggaagagatttgtggagtggaagaggtgactgcgtgcccaagtgataaagcc
tcagagcagaccttagacaccccagtgcctacaccaagtgaaccagagtctttttgcagt
caccaagaagggagaggcgaggaggcagagtccagtgagagcagaacaactacccctgtt
tgcacctcagcatcaaatgatgccatatctttagtacccacctctataccagactcgctg
ccaagatttggtgcccagggtgtggatgtcatcaggactttggcagcttcttctcaatcc
tgggaaggtgagaagaatggtggtgagcaccacccagggacaactggagttatccagcat
ggctcagacttgaaaatgcccaaagagacacttgttacagcccgaaatggatgggtagaa
agtagtgaagagcattccatgagagacgggatgctgcatgagcataggaatggaggaagt
gatgctgatggcaaatacgaatcagcctctctaccttgtctaccaagtaacgctggcgag
gaagacactggagcacacagtgattccacagagacagcatctgactttgaaaatgaaact
caagaggatgaaacggtggactggcatggaaaccagatgggcagtaacggcatgcaagct
cagaatacaaagtcacagaatcaacctgtcattcagacctcaagtcgactcacttcatca
atgttgaatcctcctcaacaccagcaaccagtcatacaggcccatgtatctaaccccaac
catactcaaactgtcattcaggctcgctttcctaatggtgtgccaaaccagcccgtcatt
catccccacaagcagcatccaattcatacccatgctataaaccatgctcaggaccagatt
cccactgcgccctcacaagcccaagtgcaagcttacctgacacaggcagagagggaccaa
agtagaaatctacggctgaatgataatagcaatggagtgaagctgtttgtctcaaccgag
gatgacagcaaacctctcggcagagaagattttgttttaaagaactcagttcctcccgtt
ggcagaagagttcaaggtacatcacgaccagtttcctctgtagaggctaacaaccctctt
gtcacccagcttcttcaaggcagcctacccttagagaaggtcttacctcagcctcactct
gtcagcaagctggaaattaatcgacttccaggtgcccctgctggtaactcaaccagtcgc
caacctctgagaaatctgggaccacgttttagaggcccatctgagtcaggaggacctatg
gaaactggtggctctgacttccagcacaaagccccatccactcgagtatctcctggacct
ggtcggaactttggatcttcaccaccgggttccactccatcacgaatggcctgcttgttt
gaggaatctagcccaagatccacaaatgttcagttcgcttctcaaccaggaggtgcagtg
cccccaggagcagtacctgtcataacatccctcccttcaaactcctctgctagaacctca
atggatatgaactctcataatgctccagtatatgaatcagctgtcattaaagagcaccct
ggacctcttcctccaaggggtgaaactccagagaggccagttggctttcaacagcatcct
aacaatctctcgcaatctgtgtgcagaaccacacctgatgctccctcacctccacatggc
gacctttgtccctcagaggttgtgcctactgttaagattaactggcgcccaagcaaaccc
caaccgcctcagcatctgacgtatcaacaacagctatctcctgtagctacagtaaagaat
gaagtctcctcacgcccttcgtgccaacaagctctgaccaaaaactcgcccgctccaaac
agtggcaatacttctgttgtaataaccaaaaaggagcctctggacaattttcacggaggt
ggtggagctatggaaggactgctaaatatggaaatgtctcttgttagaatggccaagaag
gaacaagtcaaaaatccatacggccgccaagcagacacctccgcttctcccgtctcctcc
tccccttcctcatcggcctccagtctcccttaccagctatatggcaagctaccaaaacta
cagcagagtgggggcaacggaggctcctcatccggcttcagttacacagctaatgtgtcc
gtggtggacggtagcgggttctcccgcagtttagccgacggtgtgctgcagctaaggcca
cgtgtgagcgtcggcaacagcggaggccagaacgctacacttagcattcaggcattcgcg
gacagtgctgctgaagaagtggctctcaagtgttcctgccgacttaaggctatgatcatg
tgccagggctgtggcgctttctgccatgacgattgcattggcccttcgaaactatgtgtg
tcatgtctggttgtcagatag
DBGET
integrated database retrieval system
