Labeo rohita (rohu): 127154531
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Entry
127154531 CDS
T09007
Symbol
calcoco1a
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lroh03021
]
127154531 (calcoco1a)
04131 Membrane trafficking [BR:
lroh04131
]
127154531 (calcoco1a)
Transcription machinery [BR:
lroh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
127154531 (calcoco1a)
Membrane trafficking [BR:
lroh04131
]
Autophagy
ER-phagy
ER-phagy recepters
127154531 (calcoco1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
SKICH
Motif
Other DBs
NCBI-GeneID:
127154531
NCBI-ProteinID:
XP_050952082
LinkDB
All DBs
Position
23:7724353..7747700
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AA seq
654 aa
AA seq
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MEKTWGVEFQNVGSCYFPQSRVDCHYTINPQHTWASNDWVGLFKVGWSSVKDYHTFVWAV
APSSYKEGTSVNCCVHFQASYLPGPSAQQYQFVYVDGRGEVCSCSTAFTFSAPKPLEELV
TLEEEGQGEEVGKDMLLVIPRAQLLQSRLQECLKERAELLQALEAADQNVEREKSRRERD
RSSWEQSRKELERKIGDLKEEVREYREKVEEMKKKQKEVEDLGEALTEEKRALLAQKEAN
EQRIRELEEDIKVLTQRGLERETDLERMRERAKKAAAQKKEDEDEHKNLKLKMEQTEKEL
HSLSAEFQSLRSSLAQRDTHALQLRDTITTLTHKLNSAHRKEAANEVALSELRSVQERLN
VSERCVETLRGELRDMVAQRDTAHAELHQARLQAAQLTLQLADASLALREGRANWAHEKE
TLQQNAEMDKVRLERLNDEIQQKEEILQEARMEREKAVVELGREKDCNRVQLSETRRELQ
ELKASLRVAQKEKEQLQTEIQEVMEYSRQLERRLEVLSDSKWSETALLQSSRAESPLLSD
SEDENPEALQDAHSSGPLNHYSLCEQPQADLLLPATPPPSPRHPSGMNMVVISQPAPLSS
PHQPSAHTHPHSSESEEEYEAALSGGHSSGEETALLLPDNRDTTLGDLAESPLW
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggagaagacatggggggtggagtttcagaatgtcggaagctgctactttcctcagagc
agagtggactgccactacaccatcaaccctcagcacacatgggccagtaacgactgggtt
ggactatttaaggttggctggtcatcagtcaaggactaccatacgtttgtgtgggcagta
gctccatccagctacaaagaggggacctctgtcaactgctgtgttcatttccaagcttct
tacctaccagggcctagtgcccagcagtaccagtttgtgtatgtggatggaaggggagag
gtttgttcttgcagcactgcctttaccttctcagccccaaagcccctagaggagctggtg
actctggaggaggagggtcaaggggaggaagtgggcaaggacatgctgctggtcatcccc
agagcccagctactgcagagtcgtctgcaggagtgtttgaaggagcgtgctgagctgctc
caggctctggaagcagcagaccagaacgtggagagggagaaatccaggagagagagagac
agaagctcctgggagcagagccgcaaggagctggaaaggaagatcggcgacctgaaggag
gaagtgagagaatatagggaaaaagtggaggagatgaagaagaagcagaaggaagtcgag
gatttaggtgaggccctgacagaggagaagagagccttgctggctcaaaaagaagctaat
gagcagcgaatcagagagctagaggaggacattaaagtactgacccagagaggcctggag
agagagactgacctagaaaggatgagggaacgggccaagaaagcagcagctcaaaagaag
gaagatgaggatgaacacaagaacctgaagttaaagatggaacaaacagagaaggagctg
cacagtctgtcagcagagttccagagtctgagaagctcactggcccagagagatacgcac
gccctacagctccgagacaccatcaccaccctcacacacaaactcaacagcgctcacagg
aaggaggcagccaatgaagtggctctgagtgagctccggagtgttcaagagcgtctgaac
gtgagtgagcgctgtgtggagactctgaggggagagctgagagacatggtcgctcagcgg
gacacagcacacgccgagctccatcaggcccgtctgcaggccgcacagctcacacttcag
ctggcagatgctagtctggctctgagagagggcagagctaactgggcacatgagaaagag
accctgcagcagaatgctgagatggacaaagtgcgcctggaacgcttaaatgatgagatc
cagcagaaggaggagattttgcaagaggcaaggatggagagagagaaagcagtggtggag
ctggggcgagagaaagactgcaatcgggttcagctaagcgaaactcgtcgtgagctacag
gaactgaaggccagtctcagggtggctcagaaagagaaggagcagctgcagacagaaata
caggaagtgatggagtacagccgtcagctggagagaaggctggaggtgctgagcgattct
aaatggagtgagacggcgctgctgcagagcagtcgtgcagaaagcccactgctgtctgat
tctgaggacgagaacccagaggccttgcaggacgcacattcttctgggcctctgaaccac
tacagtctgtgcgagcagccccaggccgacctgttgctcccggccaccccgccaccttcc
cccagacacccctctggcatgaatatggtggtcatcagccaacctgcacctctctcatct
ccacatcagcccagtgctcacacacaccctcacagctctgagtcggaagaagagtatgag
gcggctctgtcaggaggccacagctctggagaggagacggctcttctcctgcctgacaac
agagacactaccctcggagatctggcagagagccccttgtggtga
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