KEGG   Labeo rohita (rohu): 127154531
Entry
127154531         CDS       T09007                                 
Symbol
calcoco1a
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1
  KO
K25828  calcium-binding and coiled-coil domain-containing protein 1
Organism
lroh  Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lroh03021]
    127154531 (calcoco1a)
   04131 Membrane trafficking [BR:lroh04131]
    127154531 (calcoco1a)
Transcription machinery [BR:lroh03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    Others
     127154531 (calcoco1a)
Membrane trafficking [BR:lroh04131]
 Autophagy
  ER-phagy
   ER-phagy recepters
    127154531 (calcoco1a)
SSDB
Motif
Pfam: CALCOCO1 SKICH
Other DBs
NCBI-GeneID: 127154531
NCBI-ProteinID: XP_050952082
LinkDB
Position
23:7724353..7747700
AA seq 654 aa
MEKTWGVEFQNVGSCYFPQSRVDCHYTINPQHTWASNDWVGLFKVGWSSVKDYHTFVWAV
APSSYKEGTSVNCCVHFQASYLPGPSAQQYQFVYVDGRGEVCSCSTAFTFSAPKPLEELV
TLEEEGQGEEVGKDMLLVIPRAQLLQSRLQECLKERAELLQALEAADQNVEREKSRRERD
RSSWEQSRKELERKIGDLKEEVREYREKVEEMKKKQKEVEDLGEALTEEKRALLAQKEAN
EQRIRELEEDIKVLTQRGLERETDLERMRERAKKAAAQKKEDEDEHKNLKLKMEQTEKEL
HSLSAEFQSLRSSLAQRDTHALQLRDTITTLTHKLNSAHRKEAANEVALSELRSVQERLN
VSERCVETLRGELRDMVAQRDTAHAELHQARLQAAQLTLQLADASLALREGRANWAHEKE
TLQQNAEMDKVRLERLNDEIQQKEEILQEARMEREKAVVELGREKDCNRVQLSETRRELQ
ELKASLRVAQKEKEQLQTEIQEVMEYSRQLERRLEVLSDSKWSETALLQSSRAESPLLSD
SEDENPEALQDAHSSGPLNHYSLCEQPQADLLLPATPPPSPRHPSGMNMVVISQPAPLSS
PHQPSAHTHPHSSESEEEYEAALSGGHSSGEETALLLPDNRDTTLGDLAESPLW
NT seq 1965 nt   +upstreamnt  +downstreamnt
atggagaagacatggggggtggagtttcagaatgtcggaagctgctactttcctcagagc
agagtggactgccactacaccatcaaccctcagcacacatgggccagtaacgactgggtt
ggactatttaaggttggctggtcatcagtcaaggactaccatacgtttgtgtgggcagta
gctccatccagctacaaagaggggacctctgtcaactgctgtgttcatttccaagcttct
tacctaccagggcctagtgcccagcagtaccagtttgtgtatgtggatggaaggggagag
gtttgttcttgcagcactgcctttaccttctcagccccaaagcccctagaggagctggtg
actctggaggaggagggtcaaggggaggaagtgggcaaggacatgctgctggtcatcccc
agagcccagctactgcagagtcgtctgcaggagtgtttgaaggagcgtgctgagctgctc
caggctctggaagcagcagaccagaacgtggagagggagaaatccaggagagagagagac
agaagctcctgggagcagagccgcaaggagctggaaaggaagatcggcgacctgaaggag
gaagtgagagaatatagggaaaaagtggaggagatgaagaagaagcagaaggaagtcgag
gatttaggtgaggccctgacagaggagaagagagccttgctggctcaaaaagaagctaat
gagcagcgaatcagagagctagaggaggacattaaagtactgacccagagaggcctggag
agagagactgacctagaaaggatgagggaacgggccaagaaagcagcagctcaaaagaag
gaagatgaggatgaacacaagaacctgaagttaaagatggaacaaacagagaaggagctg
cacagtctgtcagcagagttccagagtctgagaagctcactggcccagagagatacgcac
gccctacagctccgagacaccatcaccaccctcacacacaaactcaacagcgctcacagg
aaggaggcagccaatgaagtggctctgagtgagctccggagtgttcaagagcgtctgaac
gtgagtgagcgctgtgtggagactctgaggggagagctgagagacatggtcgctcagcgg
gacacagcacacgccgagctccatcaggcccgtctgcaggccgcacagctcacacttcag
ctggcagatgctagtctggctctgagagagggcagagctaactgggcacatgagaaagag
accctgcagcagaatgctgagatggacaaagtgcgcctggaacgcttaaatgatgagatc
cagcagaaggaggagattttgcaagaggcaaggatggagagagagaaagcagtggtggag
ctggggcgagagaaagactgcaatcgggttcagctaagcgaaactcgtcgtgagctacag
gaactgaaggccagtctcagggtggctcagaaagagaaggagcagctgcagacagaaata
caggaagtgatggagtacagccgtcagctggagagaaggctggaggtgctgagcgattct
aaatggagtgagacggcgctgctgcagagcagtcgtgcagaaagcccactgctgtctgat
tctgaggacgagaacccagaggccttgcaggacgcacattcttctgggcctctgaaccac
tacagtctgtgcgagcagccccaggccgacctgttgctcccggccaccccgccaccttcc
cccagacacccctctggcatgaatatggtggtcatcagccaacctgcacctctctcatct
ccacatcagcccagtgctcacacacaccctcacagctctgagtcggaagaagagtatgag
gcggctctgtcaggaggccacagctctggagaggagacggctcttctcctgcctgacaac
agagacactaccctcggagatctggcagagagccccttgtggtga

DBGET integrated database retrieval system