KEGG   Labeo rohita (rohu): 127154571
Entry
127154571         CDS       T09007                                 
Symbol
raf1a
Name
(RefSeq) raf-1 proto-oncogene, serine/threonine kinase a isoform X1
  KO
K04366  RAF proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04010  MAPK signaling pathway
lroh04012  ErbB signaling pathway
lroh04068  FoxO signaling pathway
lroh04140  Autophagy - animal
lroh04150  mTOR signaling pathway
lroh04210  Apoptosis
lroh04218  Cellular senescence
lroh04270  Vascular smooth muscle contraction
lroh04370  VEGF signaling pathway
lroh04371  Apelin signaling pathway
lroh04510  Focal adhesion
lroh04540  Gap junction
lroh04625  C-type lectin receptor signaling pathway
lroh04810  Regulation of actin cytoskeleton
lroh04910  Insulin signaling pathway
lroh04912  GnRH signaling pathway
lroh04914  Progesterone-mediated oocyte maturation
lroh04916  Melanogenesis
lroh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    127154571 (raf1a)
   04012 ErbB signaling pathway
    127154571 (raf1a)
   04370 VEGF signaling pathway
    127154571 (raf1a)
   04371 Apelin signaling pathway
    127154571 (raf1a)
   04068 FoxO signaling pathway
    127154571 (raf1a)
   04150 mTOR signaling pathway
    127154571 (raf1a)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    127154571 (raf1a)
  09143 Cell growth and death
   04210 Apoptosis
    127154571 (raf1a)
   04218 Cellular senescence
    127154571 (raf1a)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127154571 (raf1a)
   04540 Gap junction
    127154571 (raf1a)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    127154571 (raf1a)
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    127154571 (raf1a)
  09152 Endocrine system
   04910 Insulin signaling pathway
    127154571 (raf1a)
   04912 GnRH signaling pathway
    127154571 (raf1a)
   04914 Progesterone-mediated oocyte maturation
    127154571 (raf1a)
   04916 Melanogenesis
    127154571 (raf1a)
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    127154571 (raf1a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127154571 (raf1a)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:lroh01001]
    127154571 (raf1a)
Enzymes [BR:lroh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     127154571 (raf1a)
Protein kinases [BR:lroh01001]
 Serine/threonine kinases: TKL group
  RAF family [OT]
   127154571 (raf1a)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase RBD C1_1 Kinase-like ABC1 zf-RING-like Pkinase_fungal C1_2 SNX17-27-31_F1_FERM Kdo
Other DBs
NCBI-GeneID: 127154571
NCBI-ProteinID: XP_050952153
LinkDB
Position
23:31646031..31663271
AA seq 645 aa
MEQLQGAWRSVTNGLGMKESVYESSYMSPVIRGVPCQHRSSDDSKTSRTIRVFLPNQQRT
VVNVRPGMTLHSCLIKALKVRGLQPECCAVFSLHQGQRSKKSRMDWNTDSTSLIGEELLV
EVLDHVPLTTHNFVRKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWT
NIRQLLLFPTPGESGTPSLPAFTTRRMRESLTRIPSSSVHRLSNPHVFNFTSAYPPSGAA
LTQRLRSTSTPNVSTTVAVDSSQIELDTSPGFWCHQQFCLKRRDAIRIHSSAGSSPSQSP
TGWNQPTIPTLSHRERAPSLNPQDKVKMRPRDKRDSSYYWEIEATEVVLLNRIGSGSFGT
VYKGKWHGDVAVKVLKVTNPTPEQFEAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQ
WCEGSSLYKHLHMQETNFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTV
KIGDFGLATVKARWSGSQQVEQTSGSILWMAPEVIRMQDNNPYSFQSDVYSYGIVLFELM
TGELPYSQIANRDQIIYMVGRGYLSPDLSKLYKSCPKAMKRLVADCIKKSKDERPLFPQI
LSSIELLQHSLPKINRSASEPSLHRASQSEDINSFTLTSMKLPVF
NT seq 1938 nt   +upstreamnt  +downstreamnt
atggagcagcttcagggagcgtggagatccgtcaccaacggtctgggaatgaaagagtct
gtgtatgagagctcatatatgtctcctgtgatccgaggagtgccatgtcagcaccgctcc
tcagacgactccaaaaccagccgtaccatccgagtctttctacccaaccagcagcggaca
gtggtgaatgtgcggccaggcatgacgctccacagctgtctgatcaaagcgctgaaggtt
cgagggctgcagccggagtgctgcgctgtcttcagtctccaccagggacagagaagcaag
aagtctcgtatggactggaacacagactctacctcactcattggggaggaacttctcgtg
gaggttttggaccatgttcccttaactacacacaattttgttaggaaaacatttctgaaa
ttggctttctgcgacatatgccagaagttcctgttaaatggtttccgttgccaaacatgt
ggctacaagttccatgagcactgcagcacaaaagtgcccacaatgtgtgtagactggact
aacatcagacaacttctattgtttccgactcctggtgagagtgggactccatctctacct
gcatttacaactcggagaatgagggaatccctgacaagaatccctagcagctctgtgcac
agactttcaaaccctcacgtcttcaatttcaccagcgcttaccccccgtctggagcggct
ctgacacagagactgcgatccacctccacacccaatgtcagcaccacagtggctgtcgac
agcagccagattgagctagacacgtctccaggcttctggtgccatcagcagttttgtctg
aagagaagagatgccatacgtattcatagctcagctggcagttctccaagtcagagcccg
acaggctggaaccaacccactatacccaccctgtcccacagagagcgggcaccgtccctt
aaccctcaggacaaagtaaaaatgcggccaagggataagagagactcaagctattactgg
gagattgaagctactgaggtcgtgctgctgaacaggattggctcgggctcctttggaacc
gtatacaaagggaagtggcatggtgatgtggctgtgaaggtattaaaagtcaccaaccca
acaccggaacagtttgaagccttccgcaatgaggtggcagttcttaggaaaacccgacat
gtcaacatccttttgttcatgggctacatgacaaaagacaatcttgcgattgtaacgcag
tggtgtgaaggcagcagtctctacaaacacctccacatgcaagaaaccaacttccagatg
tttcagctgatagatatcgccagacagaccgctcagggcatggactatctgcatgcaaaa
aacatcatccaccgtgacatgaaatcaaacaacatcttcttacatgaaggtctgacagtg
aagatcggggattttggactggccactgtgaaagccaggtggagcggttctcaacaggtg
gaacaaacgtcaggatctattttgtggatggcacctgaggtgatccggatgcaggacaac
aacccttacagtttccaatcagatgtgtattcttatggcattgtgctgtttgaattaatg
acaggggagttgccctactcacagatagcaaaccgagatcagattatttacatggttggt
cggggatatctgtctccagacctcagtaagctctataagagttgtcctaaagccatgaag
agactggtggctgactgtatcaagaagtcaaaggacgagaggcctcttttcccgcagatt
ctgtcctccattgagctgctgcagcattcactgccgaaaatcaaccgcagcgcctctgaa
ccctcgctgcacagagcgtcccagagtgaagacatcaactccttcacactcacctccatg
aagctgcctgtcttttag

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