Labeo rohita (rohu): 127154577
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Entry
127154577 CDS
T09007
Symbol
itga5
Name
(RefSeq) integrin alpha-5
KO
K06484
integrin alpha 5
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03266
Virion - Herpesvirus
lroh04145
Phagosome
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
lroh04810
Regulation of actin cytoskeleton
lroh04820
Cytoskeleton in muscle cells
lroh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
127154577 (itga5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127154577 (itga5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127154577 (itga5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
127154577 (itga5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127154577 (itga5)
04810 Regulation of actin cytoskeleton
127154577 (itga5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127154577 (itga5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127154577 (itga5)
04515 Cell adhesion molecules [BR:
lroh04515
]
127154577 (itga5)
04090 CD molecules [BR:
lroh04090
]
127154577 (itga5)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127154577 (itga5)
Cell adhesion molecules [BR:
lroh04515
]
Integrins
Integrin alpha subunits
127154577 (itga5)
CD molecules [BR:
lroh04090
]
Proteins
127154577 (itga5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
127154577
NCBI-ProteinID:
XP_050952166
LinkDB
All DBs
Position
23:9374103..9436600
Genome browser
AA seq
1056 aa
AA seq
DB search
MGSKRHRSKTSASSRNASCSPMGLSLLILLPLSVAFNLDVENPAVYTGPNGSYFGYSVDF
YMTDSSVSIIVGAPKANTSQPNIREGGSVFYCPWSLSQSECSSIDFDRQGDLNMTLNDTV
QQGEFKSHQWFGATVRVHEDSVLACAPLYSWRAMEDTPHADSTGSCFLSVKNFTKFVEYA
PCRTEFRGRKGQGYCQGGFSADFTQEGKLVLGGPGSYFWQGQVITAVKQEIVKAYYPGFF
LTSVDGQIQTKQKKEITFDDNYMGYSVAVGEFSGDDDEDFVTGVPRGVRLHGQVSILNGS
LDTLKTFTGEQMGSYYGYAVAVTDINNDGMKDLIVGAPMFMVRDSDGRLEELGRVYVYMQ
NGPLDLTPQLPHLTGTQTFGRFGSSITPLGDLNQDGYNDVAISCPFGGENKQGLVLIYNG
HAGGLREKPSQVIAGQWASAAPSALPASFGYSLRGGKDLDNNGYPDLIVGAFGADTAILY
RSRPIVNTSATLTVYPTMINPEEKVCTISRGNETLHVSCVNLSFCLSANGKHLPNHLEFN
VEVQLDRLKQQQKGAARRALFLDTQLPTLQRTLTVPDGARICSDTKIFLRDEKDFRDKLS
PIFVALNFSLNPQAASDRHGLRPILNYQTAELIEQKAQILLDCGEDNICVPDLKLSVHGD
RKEVYMGDDNSLTLTFNAKNDGGGAYEAELYVVLPPEADYSGIARNNESLTQLTCSYETE
NQTRYLSCDLGNPMKSGTSLWAGLRFTVPRLKDTHKFVQFDLQIRSKNENNSQSEVVPYK
VEVVVQSDVILQGVSRPDKVFFPPQNWKLTKNVMVEQDVGPSVQHTYELVNNGPSRISHT
LLQLKCPMRLQSNRFIYPLEVMTEGPVNCTTHNIVNPLNLKLQQSSTEQPPLRDAPHEHH
IEKRETHKGEVSQLNNLSCSSVDCWTLTCNIGLLERGTSAILHVRSRIWAETFMENPYKN
FILECLASYTVEKMPYAILPKVTPSGVKNMVTPVVWNKPDSTYAVPLWIIILAILAGLLL
LALLIYVLYKLGFFKRTPYGTAMEKAQLKPQAASEA
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgggctccaaaaggcaccgttcaaaaacttcagcgtcttcacgcaacgcgagctgctct
ccaatgggactttctctgttgattcttctacctttgtctgttgccttcaacttggatgtg
gagaacccagcggtgtataccggacccaacggtagttacttcgggtactcggtggacttt
tacatgactgactctagtgtgagtattatagttggagcacccaaagccaacaccagccag
cccaacatcagagaaggaggatcagtcttctactgtccgtggagcctcagccaatcagag
tgcagcagcatagactttgatagacagggagatctaaacatgaccctgaatgatacagtg
cagcagggagagttcaaatcccatcagtggtttggagcaacagtacgtgtccatgaagat
agtgtgctggcttgtgcccccctctactcctggagagccatggaggacacgcctcatgct
gattctactggctcatgttttctgtccgtcaaaaacttcaccaagtttgtagaatacgct
ccgtgtcgcacagaattccgtggaagaaaaggacaaggctactgtcaaggtggattcagt
gctgattttacacaggaaggaaagttggtgcttggaggacctggcagttacttctggcaa
ggccaagtgatcactgcggttaaacaagaaattgtcaaggcctattacccgggattcttc
ttgacgtcagtggatggccagattcagaccaaacagaaaaaggagatcacatttgatgac
aactacatgggttactcagtggctgtgggtgagtttagtggtgacgatgatgaagacttt
gtgactggagttcccaggggagtcagactgcatggacaggtttcaattcttaatggttct
ctggatactctgaaaaccttcactggtgagcagatgggttcctactatggctatgcagtg
gctgttacagacataaacaatgacggaatgaaggacctgatagttggcgctcccatgttc
atggttcgtgactctgatgggaggttggaggagttgggtcgggtctacgtgtacatgcag
aacggacctctggatctcacacctcagctacctcacctcaccggcacacagacgttcggc
cggtttggcagctccattacgcctcttggagacctcaaccaagatggttataacgatgtg
gccatcagttgtccgtttggtggggaaaacaaacaaggactggtgctcatctataatgga
catgctggaggactcagggaaaagccctctcaggtgatcgctggtcaatgggcttctgct
gcaccgtcagctctacctgccagttttggttactcccttcgcggaggcaaagacctggac
aacaatggctatccagatcttattgttggcgcattcggtgcagacacagccattctttac
aggtctcgtcctattgtgaacactagtgccaccttgactgtctatccaactatgattaat
cctgaggagaaagtttgcaccataagccgtgggaacgagaccctgcatgtgtcctgtgtc
aacctgagtttttgcctctcagccaatgggaagcacctaccaaatcatctcgagtttaac
gttgaagttcagctggaccgtctgaagcagcagcagaagggggccgcacggagagctctg
tttttagacacccagcttcccactttgcagaggactctgactgtgccagatggagccaga
atctgcagtgacaccaagatcttcttgcgggatgaaaaggacttcagggataaactatca
cctattttcgtcgcgctcaacttcagcctgaaccctcaagctgcgtcagacagacacggc
ctgcgacccatcctcaactatcagacagcggagctcatcgaacagaaagcccagattttg
ttggactgcggagaggacaacatctgcgtgcctgacctaaaactctctgtgcacggggac
aggaaggaagtgtacatgggcgatgacaactctctgaccctgactttcaacgcgaagaac
gacggaggcggagcttacgaagccgagctgtatgtggttttgccaccagaggccgactac
agcggaatagcccgtaataacgagagcctgacccaactgacctgcagttatgagacggaa
aatcagacccgttacctcagctgtgacctcgggaaccccatgaagtcaggcactagctta
tgggctggactgcgatttacagtaccacgacttaaggacacacacaaatttgtgcagttt
gacctacagattcgtagtaagaatgagaataactcccagagtgaagtcgtcccctacaag
gtggaggtggtggtccagtcagatgttattttacagggtgtctcccgaccagacaaggtc
ttctttcccccacagaactggaagttgaccaagaatgtgatggttgaacaggatgtcgga
ccctccgtccagcacacttacgagctggtgaacaacgggccgagccgcatcagtcacact
ctactgcagctcaaatgccccatgaggcttcaaagtaacaggttcatttacccgctggag
gtcatgactgagggccctgttaactgcaccacccacaacatagtcaaccccttgaacctc
aagctccagcagtcttctaccgagcagcctcctttacgagacgcgccgcacgaacaccac
atcgagaagagggaaacgcacaagggcgaggtgtctcagctgaacaatctgtcttgctcc
agtgtggattgctggactctaacgtgtaacattggcctgctggagcgagggaccagtgcc
atactgcatgttcgctcgcgaatctgggcagaaacattcatggagaatccttataaaaac
ttcattctggagtgccttgctagttacacagtggaaaagatgccatatgctattttgccc
aaagtgactcctagtggtgttaaaaatatggtcactcctgtagtctggaataagccagac
agtacgtatgctgttcctctgtggatcatcattctggctattttagccggtcttctactg
cttgcactgctgatctacgtcctctacaagctcggcttcttcaagagaactccttacggc
accgccatggaaaaagcccagctcaaacctcaggctgcatccgaggcctaa
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integrated database retrieval system
