KEGG   Labeo rohita (rohu): 127154617
Entry
127154617         CDS       T09007                                 
Symbol
tnn
Name
(RefSeq) tenascin-N isoform X1
  KO
K06252  tenascin
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04510  Focal adhesion
lroh04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    127154617 (tnn)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127154617 (tnn)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:lroh00536]
    127154617 (tnn)
Glycosaminoglycan binding proteins [BR:lroh00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   127154617 (tnn)
SSDB
Motif
Pfam: fn3 Fibrinogen_C EGF_2 Interfer-bind EGF_Tenascin Pur_ac_phosph_N SdrD_B NDNF hEGF EGF
Other DBs
NCBI-GeneID: 127154617
NCBI-ProteinID: XP_050952222
LinkDB
Position
2:complement(24112890..24151622)
AA seq 1020 aa
MIVRFNRLKRGLFLLGTLFAVSRLVLSEEVGNAEKEVTFSHVYRIDSGCKQGSQVAQLSQ
DQASEGQLVTVDGENDIVFKHNIRLQSAGCGCADSEDFKSLLYRINGLEEEVTYLKSQCA
QGCCKGGSGVDISCSGHGTYQHDSCSCKCNPGWEGPDCSISSCPDECNDNGRCVDGRCVC
YEGYTGHDCSQLTCPNDCKDKGHCVDGKCVCFSGFSGEDCSNATCPNDCIGNGRCVDGQC
ICDEGFFGIDCSMVLGPKGLRLIKVTDVSLLVEWESVKGAEYYILSYYPKGDEGAIKEVQ
VENTKNSYLITGLKPGVTYIVQVYAVIRGINSESDEIVATTDVSGIEGIKVVGQTEDSIQ
VDWKNPAIAVDYFKLTHASPDGQEGQENVAMSQEARTKHTIVGLSPGTEYQIGVQAIKGE
MEGKPSYATGVTDIDAPTNLATRKVTENSATVTWDGVRAEIDGYMLTYSSSGGASREIKV
GADATSYQLTSLKPGVLYTVFLWAYKGSRSSRKSMTEPETDIDAPTNLMTREVTEDSAMV
TWDKVQADIDGYMLSYSSIDGSGQEVRVGADSTSYKFNGLKPGVLYTVYVWAIKGPRSSK
KSSTEAETDIDAPTNLLTREVTEDSAMVTWDKVQADVDGYMLSYSSIDGTSQEVRVGADS
TSYSFTGLKPGVLYTVYVWAVKGSRSSRKASTEAETEIDAPKNLKAIDVQTETSTVTWKA
PRANIDGYILTYRAEDGSIQTVEKTLTAQENRFALSNLAMGKKYIVTLIAYRGTKRSKIV
ETSFSTVGMAYPFPMDCTQIMRNGNMESGIYTIYVNNNRSKTMQVYCDMTTDGGGWIVFQ
RRNTGKLDFMRRWREYMKGFGELADEFWLGLEKIHELTNTPTQYEVRFDLGFGSERKYAV
YDNFKVAPSKQKFKLTIGNYKGDAGDAMTYHQGGSFSTVDSDNDIALGNCALIHQGAWWY
KNCHLANLNGRFGDNRHSMGVNWEPWKGHLQSLDFAEIKIRPVGAAGRKKRSLKRRVAVY
NT seq 3063 nt   +upstreamnt  +downstreamnt
atgattgtaagatttaaccggctgaagagaggcctgttccttctagggacgctctttgcg
gtgtcccgtcttgtgctgtctgaggaggtgggtaatgcagagaaagaagtcacgttcagc
catgtctacaggattgactctggttgtaagcagggttctcaagtggctcagctttcccaa
gaccaggcctcagaaggacagttagtcacagtggatggagagaatgacattgtcttcaag
cacaacatacgcttacagtcggctggttgtggatgtgcagattctgaggacttcaagtcc
ctgctgtaccgtataaatggcctggaggaggaagtcacctatctaaagagccaatgtgct
cagggctgctgcaaaggaggttcaggtgtggacattagctgtagtgggcatggcacgtac
cagcatgactcttgcagttgtaaatgtaacccaggctgggagggtccagactgttctatc
tcatcctgccctgacgaatgcaacgataatggccgctgtgttgacggacgctgcgtctgc
tatgaaggctacaccggccatgactgcagccagctcacgtgccccaacgactgcaaagac
aaaggccactgtgtggatggcaaatgtgtgtgcttcagtggattctcaggagaagactgc
agtaacgccacctgtccgaatgactgcataggtaacggacgctgcgtggatggacagtgc
atctgcgatgagggattctttggaatcgactgctccatggttctaggaccaaaaggcctc
cgtctgatcaaagtcacagatgtgtctctgctggtggagtgggagtctgtgaaaggagcc
gagtactacatcctgtcctactatccaaagggagacgagggagccattaaagaggtccag
gtggaaaacacgaaaaactcctatctgatcacaggcctcaaacccggagtcacgtacata
gtgcaggtgtacgctgtcatcaggggcattaacagtgaatccgatgaaatagtggctacg
actgacgtctctggtattgagggaatcaaggtggtgggccagacagaggactctatccag
gtggactggaagaaccctgcgattgccgtggactacttcaaattgacccatgccagcccc
gatggtcaggaaggacaggagaacgtggcaatgagccaagaagccagaaccaagcacacc
attgtaggcctcagcccgggaacagaatatcagataggcgtgcaagcgatcaaaggtgaa
atggaaggcaagccgtcgtacgccacaggggtcacagacattgatgccccaaccaatctg
gcaaccaggaaggtgacggagaactccgcgaccgtgacgtgggatggcgttcgtgctgag
atcgacggctatatgctgacttacagctcttcagggggcgccagccgagaaattaaagtg
ggcgcagacgctacgtcttaccagctgacctctctaaaaccgggagtcctgtacacagtt
ttcctctgggcttataagggctctcgttccagtaggaagagcatgaccgagcccgaaacg
gatatagatgctcctactaacctcatgaccagggaggtgacagaggactctgcgatggtg
acgtgggacaaggtgcaggctgacattgatggctacatgctgagctacagctctatagat
ggctccggtcaggaggttcgagtaggagctgacagcacctcctacaagttcaatggtctg
aagcctggagttctctacacagtctatgtgtgggccatcaagggcccccgctctagcaaa
aagagctcgacggaagcagaaacagatatagatgctcctactaacctcttaacccgagag
gtgacagaggactcggcgatggtgacgtgggacaaggtgcaggctgacgttgatggctat
atgctgagctacagctctatagatggcaccagtcaggaggttcgagtaggagctgacagc
acctcctacagtttcactggtctgaagcctggagttctctacacagtctacgtctgggct
gtgaaaggctctcgttcaagcagaaaagcctcaactgaggctgaaacagagattgatgcg
ccaaagaatctcaaagccattgatgttcagactgaaacatccactgtaacatggaaagct
cctcgggctaatattgatggctacatcctgacctacagggctgaggatggcagcatacag
actgtggaaaaaacgttgactgcgcaggagaatagatttgctctctctaatcttgcaatg
gggaaaaagtacattgtcacccttattgcctatagaggcacgaagaggagtaaaatagtg
gagacaagctttagcacagtgggaatggcctatccgttcccaatggactgcactcagatt
atgaggaatggaaacatggagagtggcatctacaccatttacgtcaacaacaaccgtagc
aaaaccatgcaggtgtactgtgacatgacaactgatggcggcggctggattgtgttccag
agacgaaacactggcaaattagatttcatgaggcgctggagagagtatatgaaaggcttt
ggagaactggcagatgaattttggctcggcttggagaagatccatgaactgactaatact
cctacacaatatgaagtgcgtttcgatctgggcttcggatctgagcggaaatatgctgtc
tacgataacttcaaagtagcaccatccaaacagaagtttaaacttaccattggcaactac
aaaggagatgctggtgatgccatgacctaccaccagggagggtctttctccacggtggat
tcagacaatgacattgcacttggtaactgtgctctgattcaccaaggtgcatggtggtac
aagaactgccacctggccaatctgaatggcaggtttggggacaacagacacagtatggga
gtaaactgggagccatggaaggggcacctccagtctctcgactttgcagaaattaagata
cggccagtgggagcagcgggcagaaagaagaggtcattgaagaggagagtagctgtgtat
taa

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