Labeo rohita (rohu): 127154741
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Entry
127154741 CDS
T09007
Symbol
smc1al
Name
(RefSeq) structural maintenance of chromosomes 1A, like
KO
K06636
structural maintenance of chromosome 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04110
Cell cycle
lroh04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127154741 (smc1al)
04114 Oocyte meiosis
127154741 (smc1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127154741 (smc1al)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
127154741 (smc1al)
Meiosis-specific proteins
Cohesin complex and associated proteins
127154741 (smc1al)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
SlyX
ABC_tran
Motif
Other DBs
NCBI-GeneID:
127154741
NCBI-ProteinID:
XP_050952449
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All DBs
Position
23:complement(31826365..31848635)
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AA seq
1233 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVTMMYQQDNGQELSFSRIIIGSSSEYRINNKVVGLSEYSDE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRCKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVVRAHVQLQLFKLYHNESEIEKLNR
ELAHRNKEIDKDRKRMDRVEEELKEKKKELGRMMRDQQMIEKEIKEKDAELNQKRPLYIK
AKENTAHKIKKLEAARKSLQNAQKCYKKRKADMEELDREQGAVEMARQEFEERMEEEAQS
QGQDLQLEENQVKAYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKIETEAK
IKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEQAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEILESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPQIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKDRKEKLTDELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFSPRINDIKRIIQSRERDMKDLKDRMNLVEDEVFVEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLAIQLDYEKNQLKEDQEKVIMWEQ
TVKKDENEIEKLKKEEQRNMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLRSGTMDDISQEEGSSQAE
ESLSSSQKTSSTVLAKEALIEIDYSSLSEDLKDSLSEEEIKGEMNTLQQRLNEQQSILQR
ISAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVAT
NIDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALA
LLFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVQNFQAIVISLKEEFYTKADS
LIGVYPEQGDCVISKVLTFDLSQYPDANPNPNE
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgggctacttaaagttaatagagatcgaaaactttaagtcttacaaaggcagacagata
atcgggcctttccacaagtttacagcgattattgggccgaatggatcaggcaaatcaaat
ctgatggatgctatcagctttgttctggcagaaaagaccagtaacttgcgtgtgaagaca
ctgaaggatttgattcatggagctccagtgggcaaacctgcagctaaccgagcatttgtg
accatgatgtaccagcaggacaatggacaggagctttccttttccagaatcatcataggt
tcctcatcagagtaccgcatcaataataaagtggtgggtctgtctgaatacagtgatgaa
ctggagaaactgggaatcctcatcaaggccagaaacttccttgtctttcagggtgcagtt
gagtcaattgccatgaaaaaccccaaagagagaactgctctgtttgaagagatttctcgt
tctggagagcttgctcaagagtacgacagatgcaagaaagaaatggtaaaggctgaggag
gacacacagtttaactaccatcgcaagaaaaacattgctgctgagcgaaaagaagccaag
caggagaaagaagaggcggagcgctaccagcggctaaaggatgaggtggtgcgtgctcat
gtacagttacagctctttaaactgtaccacaatgaatcagagattgaaaaactgaaccga
gagctggcccaccgcaacaaagagattgataaagacaggaaacgcatggaccgtgtggag
gaggagctgaaagagaagaagaaagagctgggcagaatgatgagagaccaacagatgatt
gagaaagagatcaaggagaaggatgcagagctcaatcagaagaggcctctgtacattaaa
gccaaggagaacactgctcacaagatcaagaaactagaagctgcccgtaaatcactgcag
aatgcccagaaatgctacaaaaaacgcaaggcagacatggaggagctagaccgtgagcag
ggggcggtggagatggccagacaggagtttgaagagcgaatggaggaggaggctcaaagt
cagggacaagatctacagctggaggagaaccaggtcaaggcatatcaccgtctgaaggaa
gaggcaagtaagcgagctgctacactggctcaagagctagagaaattcaacagagaccaa
aaagctgaccaggaccgtcttgacctagaggagaggaagaaaatagaaacagaggccaag
atcaaacagaagatcagagagatcgaggagaaccagaaacgcattgagaagctggaggac
tacatcaccaccagcagacagtctctggatgagcagaagaggatggaggaggagctcaca
gaagaggtggaacaggccaaacgaagaatagatgagatcaacatggagcttaaccaggtg
atggagcagctgggagatgctcgtattgacagacaggagaacagcaggcagcagcgtaag
gctgaaatcctggagagtatcaagaggctgtatcctggatcagtgtacgggagactgatt
gacctgtgccagcccacgcagaagaaatatcagattgctgttactaaagttctgggcaaa
aacatggatgccatcattgtagactctgagaagacaggtcgtgactgtatccagtacata
aaagagcagcgtggagaacccgaaaccttcctgcctctggactacctggaggtcaagccc
acagatgagaaattgcgtgagctgcgtggtgctaaattggtgattgatgtaattcgatac
gagccaccacagattaagaaagccctgcagtatgcctgtggaaatgccctggtctgtgag
aatgtggaggacgctcgcaggattgcctttggaggaccatacagacacaagactgtggct
ctagatggaacattattccagaagtctggagtgatctccggaggtgccagtgatctgaag
gccaaagctcggcgctgggatgagaaggctgttgataaactgaaagacagaaaggaaaag
ctcacagatgagctaaaagagcaaatgaaggcaaagagaaaagaggcagagctgcgtcag
gtccagtctcaagctcatggtttgcagatgagactcaaatactctcagagtgatctggag
caaaccaagaccagacacctgtctcttaacatgcaggaaaagtcaaagctggagagtgaa
cttgctaactttagtccacgcattaatgacatcaagagaatcatccagtctagagagaga
gatatgaaagacctgaaagaccgcatgaacttggtggaggatgaggtgtttgtagagttc
tgtaaagaaattggagttcgtaacattcgtgaatttgaagaagagaaagtcaagagacag
aatgagattgcaaaaaaacgcctggagtttgagactcagaagactcgtctggctatccag
ctggattatgagaagaaccagctgaaggaagaccaggagaaggtgatcatgtgggaacag
acagtcaagaaagatgagaatgagatagagaaactcaagaaggaagagcaaaggaacatg
aagatcattgatgaaaccatggcacagctgcaggatctgaaaaaccagcatctggccaag
aaatctgaggttaatgataaaaaccatgaaatggaggagatccgcaagaagctggggggt
gccaacaaggagttgacgcagctgcagaaggaggtgacagccattgagaccaagctggag
caaaaacgcagtgacagacacaatctattgcaggcttgtaagatgcaggacatcaaactt
cccctccggtcaggaactatggatgacatcagccaggaagagggcagttctcaggctgag
gagagcctcagcagcagtcaaaagacatctagcactgttctagccaaggaagctcttatc
gagattgactacagcagcttgtcagaggacctaaaagactcactgtccgaagaggagatc
aagggggagatgaacacattacaacagagactcaatgagcagcagagcatcctgcagagg
atcagtgctcccaacatgaaagccatggagaaactagagagcgttagagacaaatttcag
gaaaccagtgatgagtttgaagctgccaggaagagggcgaagaaagccaagcaagcgttt
gaacagattaagaaggagagatttgaccgtttcaatgcctgctttgagtctgtggccacc
aacattgatgagatatataaagctctgtcccgcaacagcagtgcccaggcgtttctgggg
cctgagaacccagaggagccatacctggatggtatcaactacaactgtgtagccccaggt
aaacgtttcaggcccatggacaacctgtctggaggagaaaaaactgtggcggctctagcc
ttactgtttgccattcacagctataagcctgcgcccttctttgtgctggatgagattgat
gcggcactggacaataccaacattggcaaggttgcaaactacatcaaggatcagtcagtg
cagaacttccaggctatagtgatctccctcaaagaggagttttacactaaagcagactcc
ctgatcggagtctatccagagcaaggagactgcgtcatcagcaaagtcctgacctttgac
ctctctcagtatccagatgccaatcccaatcccaatgaatga
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integrated database retrieval system
