Labeo rohita (rohu): 127154767
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Entry
127154767 CDS
T09007
Symbol
toporsb
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127154767 (toporsb)
03036 Chromosome and associated proteins [BR:
lroh03036
]
127154767 (toporsb)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lroh03037
]
127154767 (toporsb)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127154767 (toporsb)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127154767 (toporsb)
UBL E3 ligases
127154767 (toporsb)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
127154767 (toporsb)
Cilium and associated proteins [BR:
lroh03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
127154767 (toporsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
Rad50_zn_hook
zf-ANAPC11
zf-RING_6
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
127154767
NCBI-ProteinID:
XP_050952517
LinkDB
All DBs
Position
23:complement(627801..636510)
Genome browser
AA seq
954 aa
AA seq
DB search
MMAPSKMKLRVRKRDSADKSSQRLLANASPDSKCPICLDSFKNVASLNRCLHRFCFRCIH
EWSKNKAECPLCKQPFHSIFHSVKGENDFKEFILRPPENGAALNAAAGDPPERVLRPRVL
RGRERRSHRAQQPAPSSSPPLEDDVMFDGLTDAAALAENQDVQQMVLRLTARRHGRGEGR
SLRRLRDQDVVAFRRALYRTGVRVRNARDASRQRDISAAFLRQNPGCLRRLLPWLQRELT
VLYGSHGSLVNIVQNIIISRIMNYNMEDSAIRDELRPFLLARTDHFLHELVSFARSTLNM
EAYDQQAVYDCPAPSYEEGSSSDLSVIAISEDDDNDSVDNVTENPSAVQERLASIATANG
AESLPSQSAWDDETPGPSYSTLIPSSSQSQDEGVEPSSSTAPPLTALDMTVPAASESVSP
GPGEDDEEEECLIVGYVKPMAERTPELVQLSSDSSEEEQEAATAETTALVTKSEAPQVQL
PSQSHLNLLSPSSSPGPAPMCSPQHLHSDGIGSHSREQETDYLSSHGHQSKDGSRSHSQQ
SRDKLKGNRRHRSHRSSGSKEKDKSLEQTRHSKPLDCSPSQTQNWTQSPAVSVWSGSPIS
RSHSSDCSPSQNNSNRSRERSRHARERFSHSPSHSKRRRTKEKKSKSPDSDSFLGSHHPQ
RCRKRRRRSVSSSSADSHSERSCLDKPSGKRKYKTRHLERAAQRQHKEGTASKEKRHRER
RRSRERSPSVEIIYERRAPDPHWIQRRKRRHRKRKKELRSPTVITIDSDSDRTIDCLDRV
MDVIDQTTADVEQRDATPEQDSLQNASCTLDSSNPLSEPSSPMGHSDLITERTLNLDDCV
VDVVDRSSSDCSRNMGASICEEFMPDPFPVASITTAPPSDVRLLETILQDLVDFLPRAEQ
EMGPPSPRASSPVQHEPTSSQQKDQSEMSGDAENLENENTDGDGPQETTTNTAS
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaccctctaagatgaagttgcgtgtgaggaagcgagacagcgctgacaaatcg
tctcagcgtttattggccaacgcatcgcctgattccaaatgccccatctgcctcgacagc
ttcaaaaatgtggcgtcgttaaaccgctgcctgcaccgtttctgcttccgctgcatccac
gaatggtccaagaacaaagctgagtgtccgctctgcaagcagccgttccactccatattc
cactctgtcaaaggggaaaacgactttaaggagttcatattgcggccgccggagaatgga
gcggctctgaacgccgctgctggcgatccaccagagcgtgtgctccgcccccgggttctc
cgaggcagggagaggcggagccacagggcgcaacagcccgccccttcctcctcccctccg
ctggaggacgacgtcatgttcgacggcctcacggatgcagcggcgctcgcggagaatcaa
gacgtccagcagatggtgctgaggctgacggcacgaaggcatgggcggggcgaggggcgg
agcctgcggagattgcgcgaccaagacgttgtggcgttccgacgtgcgctttacaggact
ggcgtacgcgtgcgcaacgcacgggacgccagcagacagagggacatttcagcagcattc
ttgcgtcaaaatcctggctgtttacggcggctgttaccttggctacaacgcgagctcacc
gtgttgtacggttcgcacggctcgctggtgaacatcgtgcagaacatcatcatctcacgc
atcatgaactacaatatggaagactcggctatccgagacgagctccgccccttcctgctg
gcacgcaccgatcacttcctgcatgagctggtgagcttcgctcgctccaccctcaacatg
gaggcgtacgaccagcaggccgtttacgactgtcccgctcccagctacgaggagggcagc
agctcggacctttccgttattgccatctctgaggatgatgataatgacagtgtggacaat
gtcacagaaaatccttctgctgtccaggaacgccttgcatccattgccacagcaaatgga
gcggaaagtttaccaagtcagtcggcatgggatgatgaaacgcctggtccctcgtattca
accctcatcccctcttccagccagtcacaggatgagggggtggagccaagctcaagtaca
gcccctcccctcactgccctggacatgactgtccctgcggcgagtgaaagtgtgtcacct
ggaccaggtgaagatgacgaagaggaagagtgcctgattgtgggatatgtgaaaccaatg
gccgaacgtaccccagaacttgttcagctctcctcagattcatctgaagaggagcaagag
gcggccaccgctgagacgacggccttagtaacgaaatcagaagcgccccaagtgcaactc
ccgtcacagtcccacttgaacctgcttagccctagttcctccccaggtccagctccgatg
tgcagtccacaacatttacactcagatggaatcggatcacacagcagagaacaagaaact
gattacttgtcctcccatggtcaccagtccaaagatggttcacggtcacattcacagcag
agtcgagataagctcaaaggtaacaggaggcatagaagtcaccggagctctggaagcaaa
gagaaggacaagagtttagaacaaactcggcattcgaagcccctggattgctcgccaagc
caaacacagaattggacacagagcccagcggtgtccgtttggagcggtagccccatctcc
aggtcgcatagtagcgactgctctccctcccaaaacaacagcaacaggagcagagagcgt
tcgcgccatgccagagagagattctcgcactctccttcccactccaaaaggaggcgaacc
aaggaaaagaagagtaagtcgcctgactctgactcgttccttggttcccaccatccccag
cgttgtcgtaaacgccgcagacggtcggtcagcagcagcagcgctgactcgcactctgaa
agatcctgcttagacaaacccagtggcaagcgcaagtacaaaacccggcacttggagcga
gcagcccagcgtcaacacaaggagggaaccgcaagcaaggaaaagcgtcaccgagaacgc
cgacgcagcagggaacgatctccaagtgtggagataatctacgaacgaagggcgcctgat
ccacactggatccagcggagaaagaggaggcaccggaagcgaaagaaggaactgcgttca
cccactgtgatcactattgatagcgacagcgaccgtaccatcgactgtctggaccgcgtc
atggatgttatagaccaaaccactgctgatgtcgagcaaagggatgcgactccagagcaa
gattccctccagaacgcaagttgtaccttggactcttccaatcctctatccgagccctca
agtcctatgggccacagtgacctaatcactgaacgcacactaaacctggacgactgcgtg
gtggatgtagtcgaccgcagtagttccgactgctcccgaaatatgggtgccagtatctgt
gaagagtttatgcccgaccctttcccagtggcttcgataacaacagccccaccttcagac
gtgaggctgcttgaaaccattctgcaagatcttgtggatttcctaccgagggcggagcaa
gagatggggccgccgagtcctcgtgcaagttctcccgttcaacacgaacccacttctagc
caacaaaaagaccaatcggagatgagtggagatgccgaaaacttagagaacgagaacacg
gatggcgacggaccacaagagactacgaccaacactgctagctag
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