Labeo rohita (rohu): 127154810
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Entry
127154810 CDS
T09007
Symbol
tuba1c
Name
(RefSeq) tubulin alpha-1C chain
KO
K07374
tubulin alpha
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04145
Phagosome
lroh04210
Apoptosis
lroh04530
Tight junction
lroh04540
Gap junction
lroh04814
Motor proteins
lroh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127154810 (tuba1c)
09143 Cell growth and death
04210 Apoptosis
127154810 (tuba1c)
09144 Cellular community - eukaryotes
04530 Tight junction
127154810 (tuba1c)
04540 Gap junction
127154810 (tuba1c)
09142 Cell motility
04814 Motor proteins
127154810 (tuba1c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127154810 (tuba1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127154810 (tuba1c)
03036 Chromosome and associated proteins [BR:
lroh03036
]
127154810 (tuba1c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127154810 (tuba1c)
04147 Exosome [BR:
lroh04147
]
127154810 (tuba1c)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127154810 (tuba1c)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
127154810 (tuba1c)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
127154810 (tuba1c)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127154810 (tuba1c)
Exosomal proteins of other body fluids (saliva and urine)
127154810 (tuba1c)
Exosomal proteins of colorectal cancer cells
127154810 (tuba1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
127154810
NCBI-ProteinID:
XP_050952599
LinkDB
All DBs
Position
23:7913120..7916579
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctctatccacgttggtcaggctggagtccagatcggcaatgcctgc
tgggaactctattgtcttgagcacggcattcagccggatgggcagatgcccagcgacaaa
accattggaggaggtgatgactccttcaacaccttcttcagtgagaccggagctggaaag
cacgtccccagggctgtgtttgtagacctggagcccactgtcattgatgaggtgcgcact
gggacataccgtcagctgttccatcctgagcagctcatcactggaaaggaagatgctgcc
aataactacgcccgtggtcactacactattggaaaggaaatcattgacctggtgctggac
aggattcgcaaactggctgaccagtgcacaggtctccagggtttcctggtgttccacagc
tttggtggtggcaccggttctggcttcacctctctgctgatggagcgtctgtctgtggac
tatggcaagaagtccaagctggagttctccatctaccccgctcctcaggtctccaccgct
gtggtagagccttacaactctatcctgaccacccacaccaccctagagcactccgactgt
gccttcatggtagacaatgaggccatttacgatatttgccgtaggaacctcgacattgag
cgtcctacttacactaacctcaacaggctgatcagccagatcgtgtcctccatcacagcc
tccctcaggtttgatggtgccctcaatgtcgatctcactgagttccagaccaacttggtg
ccctatcctcgtatccacttcccattggctacctatgccccagtgatctccgcagagaag
gcttaccatgagcaactctctgtggctgaaatcactaacgcttgcttcgagccagccaac
cagatggtgaaatgtgacccacgtcacggcaagtacatggcttgctgtctcttgtaccgt
ggtgacgtggtgcccaaagatgtgaacgccgcaattgccaccatcaagaccaagcgcacc
atccagtttgtggactggtgtcccactggtttcaaggttggcattaactaccagcctccc
actgtggttccaggtggtgatctggctaaggtacagagggccgtgtgcatgctgagcaac
accacagctattgctgaggcctgggctcgtctcgatcataagttcgatctgatgtacgcc
aagcgtgccttcgtgcactggtatgtgggtgagggtatggaggagggcgagttctcagag
gccagagaggacatggcagccctggagaaagattacgaggaagtcggtgtcgactccatc
gagggtgaaggtgaagaagaaggcgaggagtattaa
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