KEGG   Labeo rohita (rohu): 127154810
Entry
127154810         CDS       T09007                                 
Symbol
tuba1c
Name
(RefSeq) tubulin alpha-1C chain
  KO
K07374  tubulin alpha
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04145  Phagosome
lroh04210  Apoptosis
lroh04530  Tight junction
lroh04540  Gap junction
lroh04814  Motor proteins
lroh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127154810 (tuba1c)
  09143 Cell growth and death
   04210 Apoptosis
    127154810 (tuba1c)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    127154810 (tuba1c)
   04540 Gap junction
    127154810 (tuba1c)
  09142 Cell motility
   04814 Motor proteins
    127154810 (tuba1c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127154810 (tuba1c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lroh03019]
    127154810 (tuba1c)
   03036 Chromosome and associated proteins [BR:lroh03036]
    127154810 (tuba1c)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lroh04812]
    127154810 (tuba1c)
   04147 Exosome [BR:lroh04147]
    127154810 (tuba1c)
Messenger RNA biogenesis [BR:lroh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     127154810 (tuba1c)
Chromosome and associated proteins [BR:lroh03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     127154810 (tuba1c)
Cytoskeleton proteins [BR:lroh04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    127154810 (tuba1c)
Exosome [BR:lroh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127154810 (tuba1c)
  Exosomal proteins of other body fluids (saliva and urine)
   127154810 (tuba1c)
  Exosomal proteins of colorectal cancer cells
   127154810 (tuba1c)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 127154810
NCBI-ProteinID: XP_050952599
LinkDB
Position
23:7913120..7916579
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctctatccacgttggtcaggctggagtccagatcggcaatgcctgc
tgggaactctattgtcttgagcacggcattcagccggatgggcagatgcccagcgacaaa
accattggaggaggtgatgactccttcaacaccttcttcagtgagaccggagctggaaag
cacgtccccagggctgtgtttgtagacctggagcccactgtcattgatgaggtgcgcact
gggacataccgtcagctgttccatcctgagcagctcatcactggaaaggaagatgctgcc
aataactacgcccgtggtcactacactattggaaaggaaatcattgacctggtgctggac
aggattcgcaaactggctgaccagtgcacaggtctccagggtttcctggtgttccacagc
tttggtggtggcaccggttctggcttcacctctctgctgatggagcgtctgtctgtggac
tatggcaagaagtccaagctggagttctccatctaccccgctcctcaggtctccaccgct
gtggtagagccttacaactctatcctgaccacccacaccaccctagagcactccgactgt
gccttcatggtagacaatgaggccatttacgatatttgccgtaggaacctcgacattgag
cgtcctacttacactaacctcaacaggctgatcagccagatcgtgtcctccatcacagcc
tccctcaggtttgatggtgccctcaatgtcgatctcactgagttccagaccaacttggtg
ccctatcctcgtatccacttcccattggctacctatgccccagtgatctccgcagagaag
gcttaccatgagcaactctctgtggctgaaatcactaacgcttgcttcgagccagccaac
cagatggtgaaatgtgacccacgtcacggcaagtacatggcttgctgtctcttgtaccgt
ggtgacgtggtgcccaaagatgtgaacgccgcaattgccaccatcaagaccaagcgcacc
atccagtttgtggactggtgtcccactggtttcaaggttggcattaactaccagcctccc
actgtggttccaggtggtgatctggctaaggtacagagggccgtgtgcatgctgagcaac
accacagctattgctgaggcctgggctcgtctcgatcataagttcgatctgatgtacgcc
aagcgtgccttcgtgcactggtatgtgggtgagggtatggaggagggcgagttctcagag
gccagagaggacatggcagccctggagaaagattacgaggaagtcggtgtcgactccatc
gagggtgaaggtgaagaagaaggcgaggagtattaa

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