Labeo rohita (rohu): 127154835
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Entry
127154835 CDS
T09007
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
127154835 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127154835 (mlh3)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
127154835 (mlh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
DNA_mis_repair
HATPase_c
MutL_C
Motif
Other DBs
NCBI-GeneID:
127154835
NCBI-ProteinID:
XP_050952637
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Position
23:complement(15616247..15624548)
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AA seq
1170 aa
AA seq
DB search
MIKSLPKDVQAQLRSGVTIFSLQQCVEELILNSIDAGATCVAVKIDIDACKLQVIDNGSG
MCQEDMERVGLRYNTSKCSSLEDLENLRFYGFRGEAISSIVSLAEMVEITSRTKLSVKTH
VKTFNETNALKVVEAQSVRPSAGTTVAVYNLFHNMPVRRKRMDGVLETERIRQRVEAISL
MHPSVSFTVKKENSDHMMVQLSKTSSTYYRFVQIHGLSRAQKLGEVNYVHEQFEMTGHIG
REGHYNNSLQFLFVNGRLLLKTRVHKTLNCLLKRVSRQNNSPIANPLTSSPKQRGGCDLH
GVYVLNIKCHYSEYDICLEPAKSLIEFKDWDNVLICIEEGVKAFLTKENLVTEFSMSGND
GQSSSPVRNAKTSVAAQNLSGEETREACDALSEMKNNASDAEVQMLEKVSTNTETFSSEE
SDGEKALKGYLPSQTTFSDPTEMNNNCKEDENEVCPNTSHYDSPVNNDNNLTGSKNQKIS
IVDGKDAQDSLKKFCFPNKICPQKRKLPLNDTEEGKRGFYATNSKTFKAAPCHKLALSFE
TGSLDKFKRLFGKDAEKKQPSTEKTSVLNPLSSRKSNDFLQSFVGSTLCLEDLDKDLLRN
ISGARSPYSSECSAESSSWNKADKLSLAAKCSYLKRDKTPFNKASRDPDFLTMENSSFPV
VQDTHFDEKSCDLQESLLDDVLFGSTPVVDSVVCDSSEDFPIFTLNEQDTTIPDTSSILE
DSHLCNKNETSFVGSVNCVDEASVTSQHDPQCGNTGNEGQATNESVEIVPMSSSWLAHYD
SCLGKLVYINQVTGLSKYNSPPVEETQVPCTTDVTNMAVSVISRTGFEYRCYPFHTDIVL
PFLPKPRAERALNSGIDSRDDAQGPDSLSTLFSEWNNPVFIRPPEVAVDVTSGQAEGLAV
KIHNILYPYRFTKNMIHTMRVINQVDKKFLACLINTTEPKASESSTNEGNLLVLVDQHAA
HERVRLEGLVTDSYEDDPDTPGKKRLCSSSVSPPLEINVTEEEKRLLRSCQAFLRGLALD
VSFPKSESLNVLLERLPTCFIEKESTELRRGRRSVIKTIAEDYLREHIELLRSTGRVRGT
LPLTVHNVLASQACHGAIKFNDILSKEECCSLVNSLSSCQLPFQCAHGRPSIVPLADLNH
LEDPQDLPKPNLRKLRRMYKSWQLYGKDKT
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagagtttgcccaaagatgttcaagcacagctgcgctctggcgttaccattttc
tcattgcagcaatgtgtggaggagctcatattgaacagcatcgatgctggagcaacatgt
gtggctgtcaaaatagacatagatgcctgcaagctccaggtgatcgacaatggctcagga
atgtgccaggaggacatggaaagagtaggtctgcgatacaacacaagcaaatgcagctcg
ctggaggatctggagaatctacgcttttatggtttcagaggggaagcgatttccagcata
gtctctcttgcagaaatggtcgaaataacatctaggactaagctgtcggtgaaaacacat
gttaaaacttttaatgaaacaaatgcattgaaggttgtcgaagctcaaagtgttcgtccc
tccgcagggacgaccgtagcggtctacaatctcttccacaacatgccagttcgaagaaag
cgaatggacggtgttttagaaaccgaacggatccgtcagagagtagaggccatatctctg
atgcacccttctgtgtcatttacggtgaaaaaagaaaattcagaccacatgatggtgcag
ctctctaaaacaagcagcacgtattacaggtttgtgcagattcatggcttgagcagagct
caaaagctcggagaggtcaattacgtccatgagcagttcgaaatgaccggtcatattggc
cgtgagggtcactacaataacagcttgcagttcctgtttgtaaacggaaggcttcttctg
aagacacgcgttcataaaacactcaactgccttttgaagagagtaagcagacaaaacaac
agcccgattgcaaatccgttaacatcgagccccaaacaaaggggcggatgtgatcttcat
ggcgtctacgtgttgaatatcaaatgccattactcagagtatgacatatgcctcgaacca
gccaagtctttgatagagttcaaagactgggataatgtgctcatctgcattgaagaaggg
gtcaaagcattccttacgaaagaaaacctggtgacagagttttccatgagtgggaatgat
ggtcaatcaagtagtccagtgaggaatgcaaagacttctgtggcggcacaaaacctcagc
ggtgaggaaacacgtgaagcgtgtgatgcactgtctgagatgaagaataatgcaagtgat
gcagaagttcaaatgttggaaaaggtgtcaacaaacactgaaaccttctctagtgaagaa
tcagatggagaaaaagcacttaagggttatttgccttcgcagaccacgttttcagatcct
acagaaatgaataacaattgcaaagaagatgaaaatgaagtttgtccaaatacaagccat
tatgattcaccagttaacaacgacaacaacttgacgggaagcaaaaaccaaaagatttca
attgtggatggaaaagatgcacaagatagtttgaaaaaattctgcttcccgaataaaatt
tgtccacaaaagaggaagctgccattaaatgacactgaagaaggcaaacgtggtttttac
gctaccaactcgaagactttcaaggctgcgccgtgtcataaattagctctgtcttttgaa
acgggatctcttgacaagttcaaaaggttgtttgggaaggacgcagaaaaaaaacaaccg
agtacggaaaagacgagcgttttaaatccactatcttctagaaaatccaatgattttcta
caatcctttgtaggatctactttgtgtttggaagatttagacaaggacttgctgaggaac
atttcaggagctcgttctccatatagttctgaatgttctgctgaatcttcatcttggaac
aaagcagacaaactctcactggctgccaaatgttcctatttaaaacgtgacaaaacccca
ttcaacaaggccagcagagatccagactttcttaccatggaaaattcatctttcccagtt
gtgcaagacacacactttgatgaaaagtcctgtgatttacaagaaagcctcttagatgat
gttttatttggatccactccagttgttgattcagttgtctgtgattcttctgaagacttt
ccaatcttcactctaaatgagcaggacacaacaataccggacacttcctccattttagaa
gactcacacctctgcaacaagaatgagacttcctttgtaggaagtgtgaactgtgttgat
gaagccagcgtaacatctcagcatgatcctcagtgcggcaacacaggaaatgaaggtcag
gctacaaatgaaagtgttgaaatagtcccaatgtccagcagctggctggctcattatgac
agttgtttaggaaagctggtttacatcaaccaagttacagggctcagcaaatacaactct
cctcctgtggaggagactcaagtgccatgtaccacagatgtcactaacatggcggtcagt
gttatttcaagaacaggatttgagtacaggtgttatccatttcacacagacattgtactt
ccctttctgcccaagcctagagcagaaagagcccttaactcagggatagacagcagagat
gatgcccaaggtcccgattcactatcgactttattctcagaatggaataacccagtgttc
atacggcccccagaggttgctgtggatgtaaccagcggtcaagctgagggtcttgctgtg
aaaatccacaatattctttacccctaccggtttaccaaaaatatgatccacacaatgagg
gtcatcaatcaagtggacaagaagttccttgcttgtttgataaatacaacagagccgaaa
gcctctgaaagcagtacaaatgaagggaatcttctagtgttggttgatcaacatgctgct
catgaaagagttcgactggaggggttggtaacagactcctatgaggatgacccggacaca
cctggaaaaaagaggctgtgttcttcaagcgtatccccacccttagagattaatgtaact
gaggaggaaaagagacttctaaggtcttgtcaggccttcctgaggggtcttgctttagat
gtaagcttcccaaagagtgagtcactaaatgtgttgttggaaagacttcccacatgtttc
atagagaaagaaagcacagagctccgccgtggaagacggtcggtaattaaaaccattgca
gaggactatctgcgagaacacattgagcttctccgctcaacaggaagagtgagaggaacg
ctgcctctgacagttcacaatgtgctcgcctcacaagcttgtcatggagcaattaagttc
aatgacattttgagtaaagaggagtgctgtagtctggtgaactcgctctcctcttgtcag
cttcccttccagtgtgctcatggaagaccttccatcgtcccgctggctgatcttaaccac
ttggaagatccacaggatcttcccaaaccaaatctgaggaaactaagaagaatgtacaag
tcatggcagctctatggaaaagacaaaacgtga
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