Labeo rohita (rohu): 127154838
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Entry
127154838 CDS
T09007
Symbol
flna
Name
(RefSeq) LOW QUALITY PROTEIN: filamin-B
KO
K04437
filamin-A
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04510
Focal adhesion
lroh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127154838 (flna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127154838 (flna)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127154838 (flna)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127154838 (flna)
04147 Exosome [BR:
lroh04147
]
127154838 (flna)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
127154838 (flna)
Intermediate filaments
Intermediate filament-binding proteins
127154838 (flna)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127154838 (flna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
CH
Y_Y_Y
Big_3_5
CFSR
Cep192_D4
CH_2
Motif
Other DBs
NCBI-GeneID:
127154838
NCBI-ProteinID:
XP_050952643
LinkDB
All DBs
Position
23:complement(18955971..18998256)
Genome browser
AA seq
2577 aa
AA seq
DB search
MSQHTRPHQSSAAAAPLSNASLSPDKDADMPATEKDLAEDAPWKKIQQNTFTRWCNEHLK
CVNKRIANLQTDLSDGLRLIALLEVLSQKKMFRKYNQRPTFRQMQLENVSVALEFLDREN
IKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDEEEETEESKQKTPKQRLLGWIQ
NKLPELPITNFSRDWQSGKALGALVDSCAPGLCPDWDSWDQTKPVDNAREAMQQADDWLG
VPQVITPEEIVDPNVDEHSVMTYLSQFPKAKLKPGAPLRPKLNPKKARAYGPGIEPTGNV
VMKKAVFTVETISAGQGEVLVYVEDPAGHREEAKVTANNDKNRTYSVFYVPKVTGQHKVT
VLFAGQHISKSPFEVDVGMAQGDSSKVTAQGPGLEPAGNIANKTTYFDVYTAGAGVGEVE
VVIMDPSGKKGTVECSVEDKGNSSYRCTYKPTQEGQHTIYVTFAGGQISKSPYTVHVGEA
CNPSLCKAKGRGLQPKGLRIKETAEFKVYTKGAGTGDLKVTIKGPKGLEEPCKKKDLGDG
VYSFEYYPTTPGTYIITITWGGQHIPRSPFEVKIGSEAGPQQVRAWGPGLESGVVGKSAD
FVVEAVGDDVGTLGFSVEGPSPAKIECDDKGDGSCDVRYWPTEPGEYAVHVLCKNEDIQL
SPFMAEIAPAPGKDFYPDKVKAYGPGLQSSGLSVGKPAEFTVDAKLGGKAPLKIQAQDRD
GNPVDVQVKDNGNGTYSCSYTPRKPLKHTVMVSWGGVNIPESPFRMNIGAGCHPNKVKVS
GPGVAKTGLKAYEPTYFTVDCAEAGQGDISIGIKCAPGVVGPAEADIDFDIIRNDNDTFT
VKYTPPGAGSYTIMVLFADQAIPMTPIRIKVDPSHDASKVKAEGPGLNRTGVELNKPTHF
TVNTKAAGKAKLDAQFTGPTKGEVVRDFDIINNHDGTHTVKYTPVQQGNMGLNVTYGGDP
IPKSPFAVGVAPSLDLSKVKVAGIGDTMPVGKDQEITVKSKGAGGQGKVGAKVTGPSGKS
VPCKVEPGLSPETSQVRFIPRDKGPYEVELTYDGTPIPGSPFPVEAIAPTDPSKVRCSGP
GLERAKVGEPGQFVVDCTNAGPAELTIEIISDNGTEAEVHIQDNGDGTYTITYIPLYPGA
YTLTIRYGDQDVPNFPARLNVEPAVETSGVKVFGPGVEGKGVFREATTDFTVDARALTKT
GGNHIKTCINNPSGNHTDALIRDLGDGTYQVEYTPYEEGTHSVEVTYDNAPVPKSPFRVA
VTEGCDPARVRVHGPGLQSGITNKPNKFTVETRGAGTGGLGLAMEGPSEAKMSCTDNKDG
SCCVEYIPYEPGTYNLNVTYGGQPITGSPFSVPVHDTVDASKVKCQGQGLGNNVRANIPQ
VFSVDASKAGVAPLQVRVQGPKGECNXKNHLVRLAFLSPSFELKDCICYRLCCVGVVEPV
EVVDNGDRTHTVSYVPTREGPYSINVLYADEEIPHSPYKVKVLPTHDASKVRASGPGLNT
TGVPASLPVEFTIDAKDAGEGLLAVQITDPEGKPKKANIRDNQDGTYLVSYVPDMTGRYT
ILIKYGGDEIPYSPYRIRALPTGDASKCTVTGAGVGPTIQIGEQTVITVDAKAAGKGKVT
CTVCTPDGGEVDVDVVENEDGTFDIFYTAPQPGKYVICVRFGGEHIPNSPFQVTALEGDS
PDQLMQQTQNRQYAYAPNMGQPWATDRQLGMNGLDVAGLRPFDLVIPFTIQKGEITGDVR
MPSGKVAKPDITDNKDGTVTVKYAPTEAGLHEMDIKYDGIHIPGSPLQFYVDYVNSGHVT
AYGPGLIHGMVNKPAVFTVNTKDAGEGGLSLAIEGPSKADISCTDNQDGTCTVSYLPVLP
GDYNIIVKYNDKHIPGSPFMAKITGDDSMRMSHLKVGSAADIPLDIGELDLSQLTASLTT
PSGREEPCLLKMLRNGHVGISFVPKEIGEHLVNIKKNGRHIPNSPISVMINQSEIGDASR
VRVTGQGLSEARTFEPAEFVIDTRDAGYGGLSLSIEGPSKVDINTEDQEDGTCKVTYCPT
EPGNYIINLKFADQHVPGSAFTVKVTGEGRMKESITRRRRAASVANVGSQCDLSLKIPEI
SIADMTAQVTSPSGKVHKAEIMEGENNTYCIRFVPTEMGVHTVSVKYQGQHVPGSPFQFT
VGPLGEGGAHKVRAGGPGLERAEAGVPAEFSIWTREAGAGGLSIAVEGPSKAEIAFEDRK
DGSSGVSYIVQEPGDYEVSIRFNDEHIPDSPFVVPVASPSDDARRLTVASLQESGLKVNQ
PASFAVSLNGAKGVIDAKVHSPSGALEECCVTEIDEDKYAVRFIPRENGLYLIDVKFNGS
HIPGSPFKIRVGETGQAGDPGMVSAYGAGLEGGTTGSPCEFIVNTSSAGPGALAVTIDGP
SKVKMDCQECPEGYKVTYTPMAPGNYLISIKYGGPYHIVGSPFKAKITGSRLVNSHSMHE
TSSVLVDPVTRSVTTSQQAAPGWGSSDASRVVAKGLGLNKGFIGQKNTFSVDCSKAGRNM
LLVGVDGPKVPCEEILVKHLGNRLYNVSYQLKEKGEYILVVKWGDEHIPGSPYHITV
NT seq
7734 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacacacacgcccccaccagtcgagcgccgccgccgctcccctatccaacgct
tctctctccccggacaaggacgcagacatgcccgctacagagaaagatctcgccgaggac
gcgccatggaagaagatccagcagaacacattcacgcgttggtgcaacgagcatctgaaa
tgtgtcaataagcgcatagcgaacctgcagacggacctgagcgatgggctccggctgatc
gcgcttctggaggtgctcagccagaagaagatgttccgcaagtacaaccagcgccccacg
ttcagacagatgcagctggagaacgtctccgtggctctggagttcctcgacagggaaaac
atcaagctggtgtctatagatagtaaggccatagtggatgggaacctgaagctgattctg
ggtctgatatggactcttattctccattattccatctccatgcccatgtgggacgaggaa
gaagagaccgaagaaagcaagcagaagacgcccaaacagaggctgctcggatggatccag
aacaagctgcccgagctgcccatcaccaacttcagtcgggattggcagtcaggaaaagcc
cttggtgctttggtggacagttgtgctccaggtctttgtccagactgggattcctgggac
cagaccaagcctgtggacaatgccagggaggccatgcagcaggctgatgactggcttggt
gttcctcaggtgatcactccagaagaaatcgttgatcccaatgtggacgagcactctgtt
atgacttacctgtcccagttccccaaagccaaactcaagcctggtgccccactgcggccc
aaactcaaccccaaaaaggcccgtgcctatggaccaggtattgagcccacaggtaatgtt
gtgatgaagaaggcagtgttcactgttgagaccatcagcgctggtcagggcgaggttctg
gtttacgtggaggacccagctggtcaccgtgaggaggccaaagttacagccaacaatgac
aagaaccgcacctactcagtattctacgtaccaaaagtcactggacaacacaaggtgaca
gtgctgtttgcagggcaacacatctccaagagcccatttgaggtggatgtgggaatggct
cagggagactccagcaaggtcactgcccagggcccaggacttgagcctgctggcaacatt
gccaacaagaccacatactttgatgtctacacagctggtgctggagtaggagaggttgag
gtggtcattatggaccctagtggtaagaagggcactgttgaatgcagtgttgaggataag
ggcaacagcagctaccgatgcacctacaagcccactcaggaaggccagcacaccatctat
gtcaccttcgctggcgggcagatctccaagagcccttacactgtccatgtgggagaggcc
tgtaatccaagcctgtgtaaagccaagggccgtggtctgcagcctaaaggcttgaggatc
aaagagactgcggagtttaaggtttacaccaaaggagctggcactggagacctgaaagtc
accatcaaaggacccaagggtcttgaggagccgtgtaagaagaaggatctgggagatggc
gtgtacagcttcgagtattaccccaccacacctgggacttacatcatcacgatcacatgg
ggtggacagcacatcccacgcagtccgtttgaggtgaagattggatctgaagcaggaccg
cagcaagtcagggcatggggtccaggactggaaagtggtgtggttggcaagtcggctgac
tttgtggttgaagccgtcggagatgacgtgggcactttgggtttctcagttgagggccca
tccccagctaagattgaatgtgacgataagggagacggctcctgtgacgtgaggtactgg
cccacagaaccgggcgagtatgcggttcatgtgctctgtaagaacgaggacatccaactc
agccctttcatggctgaaattgcgcctgcgccaggaaaagacttctaccctgacaaggtg
aaggcttatggtccaggtctgcagagctctggcctttcagtcggcaaaccagcagagttc
actgtggatgccaaactaggtggcaaagctcctctaaagattcaagctcaggaccgtgat
ggaaacccagtggatgtgcaggtgaaggacaacggtaatggaacatacagctgcagctac
acccctcgcaaaccactcaaacacactgtgatggtgtcctggggcggagtcaacatccca
gagagcccattcaggatgaatattggagcagggtgccatcccaataaggtgaaagtttca
ggacctggagtggccaagactggcctgaaggcatatgaaccaacgtactttactgtggat
tgtgctgaggcaggacaaggtgacatcagcataggcatcaaatgcgctccaggtgttgtg
ggacctgctgaggctgacatcgattttgacatcattagaaatgacaatgacactttcact
gtcaaatacacccctcctggagcgggcagctacacaatcatggtgctgtttgccgatcag
gccattcccatgacgcccatcagaatcaaggttgatccctctcatgatgccagcaaggtt
aaagcagagggccctggactcaaccgtactggtgtggagctgaacaaacccactcacttc
actgtgaacaccaaggctgctggcaaagctaagcttgatgctcagttcactggacccacc
aagggagaggtggtgcgtgactttgacatcattaacaatcatgacggcacccacactgtt
aaatacacccctgttcaacagggcaatatgggtttgaatgtcacctatggtggtgatccc
attcccaagagcccgtttgctgtaggagttgccccatccctggacctcagtaaagttaaa
gtggctggaattggagatacaatgcccgttggaaaggatcaggagatcacagtcaagtcc
aaaggagcaggtggtcagggcaaggttggcgccaaggtcacaggtccatctggcaaatcg
gtgccttgtaaagttgaaccaggccttagccctgaaaccagtcaggtccgttttatcccc
agggataagggaccgtatgaggttgaactgacatatgacggcacccccatccccggcagt
ccattccctgtggaagccattgcacctactgacccatctaaggtgcgatgttccgggcca
ggtctggagcgagctaaggttggcgagccaggacagtttgtggtcgattgcactaatgct
ggtcctgctgagctgactattgagatcatctcagacaatggcaccgaagctgaagtccac
attcaggacaatggggatggaacatacactatcacttatattcctctgtatcctggagct
tacaccctcaccatccgctacggcgatcaggatgtgccaaacttcccagccagactcaac
gtggagcctgctgtggaaaccagtggagtcaaagtgttcggacctggagtggaaggcaaa
ggtgttttccgggaggccactaccgatttcactgtggatgctcgtgcacttaccaaaacg
ggtggcaatcatatcaagacctgtatcaacaacccatcaggcaaccacactgacgctctg
atcagagacctgggagacggcacctatcaagtggaatacacaccttatgaagagggcaca
cacagtgttgaggttacatacgataacgccccagttcccaagagcccgtttcgtgtggca
gtgactgaaggttgtgacccagcacgtgtgcgtgtacatggtccaggacttcagtctggc
atcaccaacaaacccaacaagtttacagtggagacccgaggggctggtacaggcggcctg
ggactggctatggagggaccttctgaggccaaaatgtcctgcactgataacaaagatggc
agctgttgtgttgaatacatcccatatgagccaggcacatacaacctcaatgtcacctat
ggaggccaaccgatcactggaagccccttctctgtacctgtccacgatactgttgatgca
tctaaagtgaaatgccaaggtcaggggcttggaaacaacgtgcgtgccaatatcccacag
gtcttttctgtggatgcaagcaaggctggagtggctcccttgcaggtcagagtacaggga
cccaaaggtgagtgtaatntcaagaatcatcttgttcgtttggcttttctttccccctcc
tttgaattaaaggactgtatctgttaccgtttatgttgtgtaggtgtcgtagagcctgtt
gaggtggtggataatggtgaccgcacccacacagtcagctatgtacccaccagagagggg
ccgtattctataaatgtcctgtatgcggatgaggagatcccacacagtccttataaggtc
aaggttctgcccactcatgatgctagtaaggtccgtgccagcggccctggtctgaatacc
accggtgttcctgccagtctgcctgtggagttcactattgacgccaaagatgctggagag
ggactattggctgtccagatcactgaccctgaagggaagccaaagaaggctaacattcgt
gataatcaagatgggacgtatcttgtgtcctacgtgcctgacatgactggccgctacact
attctaatcaaatatggtggtgatgagatcccatattctccatatcgtatcagagcccta
ccaacgggagacgccagcaaatgcacggtcacaggcgctggagtcggtccaaccattcag
atcggagagcagactgtcatcactgtggacgcgaaggctgctgggaagggcaaggtgact
tgcacggtgtgcactccagacggaggcgaggtggatgtggacgtagttgaaaatgaagat
ggaacatttgacatcttctacacggcaccccagcctggcaaatacgtcatctgtgtgcgc
ttcggtggagagcacatccccaacagccccttccaagtcacggctttggaaggtgactct
cctgaccaactaatgcagcagacccagaaccggcagtacgcctacgcgcccaacatgggc
cagccatgggctacagacaggcagttgggcatgaacggactggacgtcgctggactgaga
ccctttgacttggtcattcctttcaccatccagaaaggagaaattacaggtgatgtaaga
atgccttctggaaaagtggccaagcctgacattacagataacaaggatggtacagtcacc
gtgaaatacgccccaactgaagctggcctgcatgagatggacatcaaatatgacggaata
cacatcccaggaagtccactgcagttctatgtggattatgtcaacagtggtcatgtgact
gcctatggtcctggtctaattcatggcatggttaataaacctgcagtcttcactgtcaac
accaaggatgctggagagggtggtctgtctctggccattgagggtccatcaaaggcagac
atcagctgcactgataatcaggatggtacctgcactgtctcttacctccctgttcttcct
ggagactacaacatcattgtcaagtacaacgacaagcacattcccggcagtcctttcatg
gccaagatcacaggagacgactcgatgcgcatgtctcatctgaaggtgggctctgctgct
gacattcctctagacatcggcgagctggacctcagccagctgaccgcgtctctcaccacc
ccctctggccgggaggagccatgtctgctcaagatgctcaggaacgggcatgtgggtatc
tcctttgtgcccaaggaaattggagagcatctggtaaacattaagaaaaatggacgtcat
attcctaatagccccatttcagtcatgatcaaccaatcagagatcggtgatgccagccgt
gtgcgtgtaactggtcaaggcctgagtgaagcccgcacctttgagcctgcagaatttgtc
attgacaccagagatgcaggatatggaggactcagtttgtctattgagggacccagtaaa
gtagatatcaacactgaagatcaagaagatggcacctgcaaagtcacatattgccccaca
gagcctggaaattacataattaacctcaaatttgcagaccaacatgttccaggaagtgct
tttaccgtcaaagtgacaggagagggtcggatgaaggagagcatcacccgcagaagaaga
gctgcctctgtggccaatgtcggcagccagtgcgacctcagcctgaagatccccgagatc
agcatcgctgacatgaccgcacaggtgaccagcccatctggcaaagtacacaaggctgag
atcatggagggtgaaaacaacacgtactgcattcgcttcgtgcccacggagatgggcgtg
cacacggttagtgtgaagtatcaaggtcagcatgtccccggatcccccttccagttcact
gtgggtcctcttggagaaggaggcgcccataaagtccgtgctggaggcccaggattggaa
agagcagaggcgggtgtaccagctgagttcagcatttggacccgtgaagcaggagctggt
ggtctgtccattgcggtcgagggacccagcaaggcagagattgcttttgaagaccgcaaa
gatggatccagcggcgtctcctacattgtccaggagcctggcgattatgaagtgtccatc
aggttcaatgatgagcacatccctgacagtccgtttgtggtgcctgtggcctcgccgtct
gatgacgcccgccgcctcactgttgccagtcttcaggagtccggattaaaggtgaaccag
ccggcctcttttgctgtgagcctaaacggagcgaagggagtcatcgacgctaaagttcac
agcccatccggagcacttgaagagtgctgcgtcacagaaatcgatgaagataagtatgct
gtgagattcatccccagggagaatggcctgtacctgatagatgtgaaatttaatggctct
cacatccctggaagccccttcaagatccgtgttggtgagacgggccaggctggagaccca
ggaatggtgtctgcttatggagctggtctggaaggaggcaccactggatctccatgtgaa
ttcattgtgaacacaagttcagctggcccaggtgctttggcagtgactattgatgggcct
tccaaggtgaagatggactgtcaggaatgcccagagggctacaaggtcacctacacgcct
atggcacctggaaattacctaatttctatcaaatatggtggaccataccatatcgttggc
agcccgttcaaagctaaaattacaggctcccgattggtcaatagccacagcatgcacgag
acttcatcggtactggttgaccccgtgacccgcagtgtgacgaccagccagcaggcagca
ccaggctggggcagctctgacgccagccgtgtagttgccaagggtctgggactcaacaag
ggcttcataggacagaagaacactttcagtgtggactgtagtaaagcagggagaaacatg
ctcttggttggagtggatggacccaaagtaccctgtgaggagatcttggtgaaacacttg
ggtaaccgtctctataatgtgtcctaccagctgaaggagaaaggagagtacatcctggtg
gtgaaatggggcgacgagcacatccccggcagcccgtatcacatcactgtctaa
DBGET
integrated database retrieval system
